RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RANP62826 216 aaKnown RBP4.22□□□□□ -1.73
ATXN3-224ENST00000554040 UFSP1Q6NVU6 142 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 MIR17HGQ75NE6 70 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 FXYD5Q96DB9 178 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 TVP23CQ96ET8 276 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 PHYHIPLQ96FC7 376 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 DIRAS2Q96HU8 199 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 VCX3AQ9NNX9 186 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 UQCC1Q9NVA1 299 aa4.22□□□□□ -1.73
ATXN3-224ENST00000554040 A0A087WXM4 84 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 C9orf170A2RU37 121 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 FAM231BA6NCW3 169 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 F6UZH7 168 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 CST7O76096 145 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 ANGP03950 147 aaKnown RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 TCRBP04435 133 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 RNASE3P12724 160 aaKnown RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 FAUP35544 74 aaKnown RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 BAXQ07812 192 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 IAH1Q2TAA2 248 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 MPV17L2Q567V2 206 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 MCFD2Q8NI22 146 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 LYPD6BQ8NI32 183 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 GSKIPQ9P0R6 139 aa4.21□□□□□ -1.74
ATXN3-224ENST00000554040 RSL24D1Q9UHA3 163 aaKnown RBP4.21□□□□□ -1.74
ATXN3-224ENST00000554040 MUC21A0A0G2JKD1 596 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 CCSO14618 274 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 MT3P25713 68 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 BCAP31P51572 246 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 COX6A2Q02221 97 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 CTF1Q16619 201 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 LGALSLQ3ZCW2 172 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-224ENST00000554040 STPG4Q8N801 248 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 TMEM75Q8N9X5 138 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 HYLS1Q96M11 299 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 NMES1Q9C002 83 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 JPT2Q9H910 190 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 PSORS1C2Q9UIG4 136 aa4.2□□□□□ -1.74
ATXN3-224ENST00000554040 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 TRAV26-2A0A0B4J265 109 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 UBE2L5PA0A1B0GUS4 154 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 FAM24AA6NFZ4 105 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 L7N2F9 121 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 FGF7P21781 194 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 S100A11P31949 105 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 UBE2D3P61077 147 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 UBE2D2P62837 147 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 PRR4Q16378 134 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 SPANXN2Q5MJ10 180 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 Q6ZRP5 223 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 GOLT1AQ6ZVE7 132 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 ZNF664Q8N3J9 261 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 BCL7BQ9BQE9 202 aa4.19□□□□□ -1.74
ATXN3-224ENST00000554040 SLIRPQ9GZT3 109 aaKnown RBP4.19□□□□□ -1.74
ATXN3-224ENST00000554040 NAA50Q9GZZ1 169 aaKnown RBP4.19□□□□□ -1.74
ATXN3-224ENST00000554040 TRBV7-3A0A075B6L6 115 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 TRBV10-1A0A0K0K1A3 114 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 RHODO00212 210 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 OR7C2O60412 319 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 NDUFS6O75380 124 aaKnown RBP4.18□□□□□ -1.74
ATXN3-224ENST00000554040 IFNA7P01567 189 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 ZNF80P51504 273 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-224ENST00000554040 AP3S2P59780 193 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 S100A10P60903 97 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 PKIAP61925 76 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 RPL36AP83881 106 aaKnown RBP4.18□□□□□ -1.74
ATXN3-224ENST00000554040 ATP6V1FQ16864 119 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 LINC00269Q8N2A0 174 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 TOMM5Q8N4H5 51 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 CMTM2Q8TAZ6 248 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 NPCDR1Q9BY65 106 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 OTORQ9NRC9 128 aa4.18□□□□□ -1.74
ATXN3-224ENST00000554040 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
ATXN3-224ENST00000554040 SULT1A1P50225 295 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 UBE2L3P68036 154 aaKnown RBP4.17□□□□□ -1.74
ATXN3-224ENST00000554040 HBG1P69891 147 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 HBG2P69892 147 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 CLPSL2Q6UWE3 100 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 CHCHD5Q9BSY4 110 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 C11orf1Q9H5F2 150 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 LYRM2Q9NU23 88 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-224ENST00000554040 OR5AC2Q9NZP5 309 aa4.17□□□□□ -1.74
ATXN3-224ENST00000554040 LSM5Q9Y4Y9 91 aaKnown RBP4.17□□□□□ -1.74
ATXN3-224ENST00000554040 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 IGKV3D-20A0A0C4DH25 116 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 PTTG1O95997 202 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 GCGP01275 180 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 GZMBP10144 247 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 RPS10P46783 165 aaKnown RBP4.16□□□□□ -1.74
ATXN3-224ENST00000554040 RBX1P62877 108 aa4.16□□□□□ -1.74
ATXN3-224ENST00000554040 FAM74A1Q5RGS3 127 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms