RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
PSEN1-209ENST00000553855 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 RBFOX3A6NFN3 312 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 KRBOX1C9JBD0 128 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 H3BVH4 76 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 ARMS2P0C7Q2 107 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 CRYBA4P53673 196 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 RPS20P60866 119 aaKnown RBP5.81□□□□□ -1.48
PSEN1-209ENST00000553855 FHL2Q14192 279 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 RHOHQ15669 191 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 CENPWQ5EE01 88 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 ZFP82Q8N141 532 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 C9orf85Q96MD7 179 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
PSEN1-209ENST00000553855 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
PSEN1-209ENST00000553855 M0R2N4 97 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 M0R381 172 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 RHODO00212 210 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 RS1O15537 224 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 CXCL1P09341 107 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
PSEN1-209ENST00000553855 CRIP1P50238 77 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 CEBPGP53567 150 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 TTC32Q5I0X7 151 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 ZNF506Q5JVG8 444 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 DNLZQ5SXM8 178 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 NEGR1Q7Z3B1 354 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 VSIG2Q96IQ7 327 aa5.8□□□□□ -1.48
PSEN1-209ENST00000553855 A0A096LPF7 62 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 IGHV3-73A0A0B4J1V6 119 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 RAB19A4D1S5 217 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 TMEM250H0YL14 139 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 P01737 135 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 SERTAD4-AS1Q5TG53 156 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 CFAP126Q5VTH2 177 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 ZFP2Q6ZN57 461 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 DERL1Q9BUN8 251 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 Q9H8V8 135 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
PSEN1-209ENST00000553855 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
PSEN1-209ENST00000553855 TRAV9-2A0A087WT02 112 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 K7EQD1 137 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 SMIM17P0DL12 118 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 GATA1P15976 413 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-209ENST00000553855 FOXI1Q12951 378 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 ESRGQ1W209 222 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 FAM74A4Q5TZK3 123 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-209ENST00000553855 OR2D3Q8NGH3 330 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 TPPP3Q9BW30 176 aa5.78□□□□□ -1.48
PSEN1-209ENST00000553855 NBDYA0A0U1RRE5 68 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 SIVA1O15304 175 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 RAB14P61106 215 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 RPL19P84098 196 aaKnown RBP5.77□□□□□ -1.49
PSEN1-209ENST00000553855 C1orf134Q5TEV5 83 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 UPK3BQ9BT76 320 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 PARLQ9H300 379 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 HERC2O95714 4834 aa5.77□□□□□ -1.49
PSEN1-209ENST00000553855 LYSTQ99698 3801 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 A0A1W2PPQ1 181 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 F2Z2F3 143 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
PSEN1-209ENST00000553855 NXPH4O95158 308 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 OR5AL1P0C617 328 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 CACNG7P62955 275 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 PEA15Q15121 130 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 TEX261Q6UWH6 196 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 FER1L6-AS1Q8NA97 138 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 LYPD6BQ8NI32 183 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 SFRP2Q96HF1 295 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 FAM210AQ96ND0 272 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 AP1S3Q96PC3 154 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 SCRT2Q9NQ03 307 aa5.76□□□□□ -1.49
PSEN1-209ENST00000553855 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
PSEN1-209ENST00000553855 EVI2AP22794 236 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 SSTP61278 116 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
PSEN1-209ENST00000553855 GAGE1Q13065 139 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 GAGE4Q13068 117 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 GAGE5Q13069 117 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 ZNF56Q15929 161 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 OR10J3Q5JRS4 329 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 SMIM15Q7Z3B0 74 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
PSEN1-209ENST00000553855 ATP6V0E2Q8NHE4 81 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms