RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 LZICQ8WZA0 190 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 IFI27L1Q96BM0 104 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 BPESC1Q9GZL8 116 aa0.18□□□□□ -2.38
LINC00648-201ENST00000553747 LOC105371267A0A1B0GV96 52 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 SSC5DA1L4H1 1573 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 F2Z2F3 143 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 TFF1P04155 84 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 NPC2P61916 151 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 SMIM21Q3B7S5 101 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 SPANXN1Q5VSR9 72 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 SLC48A1Q6P1K1 146 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 VMO1Q7Z5L0 202 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 PRR15LQ9BU68 103 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 SMIM3Q9BZL3 60 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 COPZ2Q9P299 210 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 PHIPQ8WWQ0 1821 aa0.17□□□□□ -2.38
LINC00648-201ENST00000553747 LRRC37A3O60309 1634 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 BICRAQ9NZM4 1560 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 TRAV12-3A0A0B4J271 114 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 J3QR89 54 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 PITX3O75364 302 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 LINC00694P0DN24 101 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 COX4I1P13073 169 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 SSBP1Q04837 148 aaKnown RBP0.16□□□□□ -2.38
LINC00648-201ENST00000553747 SPCS2Q15005 226 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 Q6ZUT4 128 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 SMIM11BQ8TCY0 68 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 ANP32BQ92688 251 aaKnown RBP0.16□□□□□ -2.38
LINC00648-201ENST00000553747 NDUFA12Q9UI09 145 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 NINQ8N4C6 2090 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 GRIN2AQ12879 1464 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 PXDNQ92626 1479 aa0.16□□□□□ -2.38
LINC00648-201ENST00000553747 GVQW2A0A096LPI5 108 aaPredicted RBP0.15□□□□□ -2.39
LINC00648-201ENST00000553747 M0R2Z0 102 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 FAM74A4Q5TZK3 123 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 MIC13Q5XKP0 118 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 SCIMPQ6UWF3 145 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 C20orf197Q8N268 126 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 COX7B2Q8TF08 81 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 MAFIPQ8WZ33 124 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 TMEM242Q9NWH2 141 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 AKAP11Q9UKA4 1901 aa0.15□□□□□ -2.39
LINC00648-201ENST00000553747 ESPL1Q14674 2120 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 SPAG17Q6Q759 2223 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 CDK5RAP2Q96SN8 1893 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 M0R129 80 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 NPFFO15130 113 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 C4orf33Q8N1A6 199 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 Q96NJ1 140 aa0.14□□□□□ -2.39
LINC00648-201ENST00000553747 TPRP12270 2363 aaKnown RBP0.14□□□□□ -2.39
LINC00648-201ENST00000553747 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
LINC00648-201ENST00000553747 PARP14Q460N5 1801 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 PIRTP0C851 137 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 UBE2D1P51668 147 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 RRAS2P62070 204 aaPredicted RBP0.13□□□□□ -2.39
LINC00648-201ENST00000553747 SMCO1Q147U7 214 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 C9orf116Q5BN46 136 aaPredicted RBP0.13□□□□□ -2.39
LINC00648-201ENST00000553747 TSTD1Q8NFU3 115 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 C10orf82Q8WW14 230 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 TMEM191AQ9H0A3 160 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 PAIP2BQ9ULR5 123 aaKnown RBP0.13□□□□□ -2.39
LINC00648-201ENST00000553747 V9GYV3 84 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 MAST4O15021 2626 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 PIEZO1Q92508 2521 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 NWD2Q9ULI1 1742 aa0.13□□□□□ -2.39
LINC00648-201ENST00000553747 GOLGA3Q08378 1498 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 TRBV7-1A0A0A6YYK4 115 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 K7ERU9 68 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 IFNA17P01571 189 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 APODP05090 189 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 GUCA1AP43080 201 aaPredicted RBP0.12□□□□□ -2.39
LINC00648-201ENST00000553747 RPS25P62851 125 aaKnown RBP0.12□□□□□ -2.39
LINC00648-201ENST00000553747 TCEAL4Q96EI5 215 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 PFDN5Q99471 154 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 PSMG3Q9BT73 122 aaPredicted RBP0.12□□□□□ -2.39
LINC00648-201ENST00000553747 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
LINC00648-201ENST00000553747 SPEF2Q9C093 1822 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 IBTKQ9P2D0 1353 aaPredicted RBP0.11□□□□□ -2.39
LINC00648-201ENST00000553747 PHLPP1O60346 1717 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 CLPSL1A2RUU4 121 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 PIPP12273 146 aaPredicted RBP0.11□□□□□ -2.39
LINC00648-201ENST00000553747 COPZ1P61923 177 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 TPT1P8Q9HAU6 139 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 RPRMQ9NS64 109 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 ABCA1O95477 2261 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 JMJD1CQ15652 2540 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 ZFYVE26Q68DK2 2539 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 MYH13Q9UKX3 1938 aa0.11□□□□□ -2.39
LINC00648-201ENST00000553747 ZNF518AQ6AHZ1 1483 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 BCL9LQ86UU0 1499 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 IFT140Q96RY7 1462 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 IFT172Q9UG01 1749 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 TTC28Q96AY4 2481 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 TMEM14DPA8MWL7 114 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 IL5P05113 134 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 NMBP08949 121 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 ACYP2P14621 99 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 CBLN1P23435 193 aa0.1□□□□□ -2.39
LINC00648-201ENST00000553747 EDDM3BP56851 147 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms