RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GYPEP15421 78 aa9.66□□□□□ -0.86
TUBB3-202ENST00000553656 CCL18P55774 89 aa9.66□□□□□ -0.86
TUBB3-202ENST00000553656 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
TUBB3-202ENST00000553656 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
TUBB3-202ENST00000553656 SAMD10Q9BYL1 202 aa9.66□□□□□ -0.86
TUBB3-202ENST00000553656 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
TUBB3-202ENST00000553656 DYNC2H1Q8NCM8 4307 aaKnown RBP9.66□□□□□ -0.86
TUBB3-202ENST00000553656 LINC00862A6NCI5 91 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 TRGC1P0CF51 173 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 SRIP30626 198 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 WDR73Q6P4I2 378 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.86
TUBB3-202ENST00000553656 A0A096LPF7 62 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 CRYGDP07320 174 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 TWIST1Q15672 202 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 ZNF56Q15929 161 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
TUBB3-202ENST00000553656 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 V9GYV3 84 aa9.64□□□□□ -0.87
TUBB3-202ENST00000553656 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 FAM231BA6NCW3 169 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 F5H697 171 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 F8W036 122 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 K7EQD1 137 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 NTF3P20783 257 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 RNF212Q495C1 297 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 UFSP1Q6NVU6 142 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 SMIM15Q7Z3B0 74 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
TUBB3-202ENST00000553656 NACAE9PAV3 2078 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 HIGD1CA8MV81 97 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 PPP1R2P9O14990 202 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 MGPP08493 103 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 RAB4BP61018 213 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 CNFNQ9BYD5 112 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
TUBB3-202ENST00000553656 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
TUBB3-202ENST00000553656 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
TUBB3-202ENST00000553656 MT-ND4LP03901 98 aa9.61□□□□□ -0.87
TUBB3-202ENST00000553656 FOXA3P55318 350 aaPredicted RBP9.61□□□□□ -0.87
TUBB3-202ENST00000553656 FAM3BP58499 235 aaPredicted RBP9.61□□□□□ -0.87
TUBB3-202ENST00000553656 Q6ZSN1 163 aa9.61□□□□□ -0.87
TUBB3-202ENST00000553656 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
TUBB3-202ENST00000553656 ALMS1Q8TCU4 4167 aa9.6□□□□□ -0.87
TUBB3-202ENST00000553656 A0A1B0GUT8 65 aa9.6□□□□□ -0.87
TUBB3-202ENST00000553656 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
TUBB3-202ENST00000553656 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
TUBB3-202ENST00000553656 TRBV10-1A0A0K0K1A3 114 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 H7C1H1 209 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 EVI2AP22794 236 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 GAGE1Q13065 139 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 GAGE4Q13068 117 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 GAGE5Q13069 117 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 RIGQ13278 110 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 ESRGQ1W209 222 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 GAGE13Q4V321 117 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 ANAPC16Q96DE5 110 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
TUBB3-202ENST00000553656 SMIM27A0A1W2PRY6 76 aa9.58□□□□□ -0.88
TUBB3-202ENST00000553656 ADCYAP1P18509 176 aa9.58□□□□□ -0.88
TUBB3-202ENST00000553656 RPL36AP83881 106 aaKnown RBP9.58□□□□□ -0.88
TUBB3-202ENST00000553656 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
TUBB3-202ENST00000553656 RPL36ALQ969Q0 106 aaKnown RBP9.58□□□□□ -0.88
TUBB3-202ENST00000553656 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
TUBB3-202ENST00000553656 KIF25-AS1Q9Y6Z4 181 aa9.58□□□□□ -0.88
TUBB3-202ENST00000553656 LYPD5Q6UWN5 251 aa9.57□□□□□ -0.88
TUBB3-202ENST00000553656 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
TUBB3-202ENST00000553656 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.56□□□□□ -0.88
TUBB3-202ENST00000553656 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
TUBB3-202ENST00000553656 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 LINC00315P59091 139 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
TUBB3-202ENST00000553656 IGLV2-18A0A075B6J9 118 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 A0A1B0GW15 77 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 S100A8P05109 93 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 TIRAPP58753 221 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 CARHSP1Q9Y2V2 147 aaKnown RBP9.54□□□□□ -0.88
TUBB3-202ENST00000553656 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
TUBB3-202ENST00000553656 KMT2CQ8NEZ4 4911 aaKnown RBP9.54□□□□□ -0.88
TUBB3-202ENST00000553656 TRAV8-6A0A0B4J262 113 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 M0QY20 66 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 LINC00694P0DN24 101 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 CTDSP1Q9GZU7 261 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 Q9H8V8 135 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 Q9UF83 564 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 SACSQ9NZJ4 4579 aa9.53□□□□□ -0.88
TUBB3-202ENST00000553656 A0A087WWC5 75 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms