RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CNOT1A5YKK6 2376 aaKnown RBP3.08□□□□□ -1.92
RDH11-204ENST00000553578 NBASA2RRP1 2371 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 TRIOBPQ9H2D6 2365 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 TRAV12-2A0A075B6T6 113 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 TRBV7-7A0A0K0K1E9 115 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 KNCNA6PVL3 124 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 C12orf77C9JDV5 145 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 RNASE2P10153 161 aaKnown RBP3.08□□□□□ -1.92
RDH11-204ENST00000553578 PRB4P10163 310 aaPredicted RBP3.08□□□□□ -1.92
RDH11-204ENST00000553578 S100A4P26447 101 aaKnown RBP3.08□□□□□ -1.92
RDH11-204ENST00000553578 PAX8Q06710 450 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 PSMG4Q5JS54 123 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 FAM201AQ5SY85 155 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 Q6ZSN1 163 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 MKXQ8IYA7 352 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 DPH3P1Q9H4G8 78 aa3.08□□□□□ -1.92
RDH11-204ENST00000553578 H3BT86 120 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 LGALS9O00182 355 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 MRPL33O75394 65 aaKnown RBP3.07□□□□□ -1.92
RDH11-204ENST00000553578 IGHV3-13P01766 116 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 HBDP02042 147 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 IFI27P40305 119 aaPredicted RBP3.07□□□□□ -1.92
RDH11-204ENST00000553578 PAXXQ9BUH6 204 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 CCL28Q9NRJ3 127 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 FAM30AQ9NZY2 134 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 LY6LH3BQJ8 138 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 PLXNB1O43157 2135 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 EP300Q09472 2414 aaPredicted RBP3.07□□□□□ -1.92
RDH11-204ENST00000553578 MIC13Q5XKP0 118 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 WDR86Q86TI4 376 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 INTS1Q8N201 2190 aaKnown RBP3.07□□□□□ -1.92
RDH11-204ENST00000553578 IMUPQ9GZP8 106 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 FAM215AQ9Y5M1 114 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 TRAV26-2A0A0B4J265 109 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 A0A0G2JRQ6 117 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 M0R1B8 84 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 SNRPD3P62318 126 aaKnown RBP3.07□□□□□ -1.92
RDH11-204ENST00000553578 SS18Q15532 418 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 FDCSPQ8NFU4 85 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 FREM1Q5H8C1 2179 aa3.07□□□□□ -1.92
RDH11-204ENST00000553578 USF3Q68DE3 2245 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 LOC100131303A0A0U1RQF7 123 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 P0DMU3 169 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 FAM231AP0DMU4 169 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 FAM231CP0DMU5 169 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 ZNF818PQ6ZRF7 136 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 LINC00305Q7Z4B0 112 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 CD177Q8N6Q3 437 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 MPLKIPQ8TAP9 179 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 AKAP6Q13023 2319 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 DOPEY2Q9Y3R5 2298 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 CADP27708 2225 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 ARFGEF3Q5TH69 2177 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 DSCAML1Q8TD84 2053 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 TRAV8-3A0A0A6YYJ7 113 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 PRAC2D3DTV9 90 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 ZNF22P17026 224 aaPredicted RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 DAZ2Q13117 558 aaKnown RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 ATXN8Q156A1 80 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 DAZ4Q86SG3 579 aaKnown RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 MYOZ3Q8TDC0 251 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 BBC3Q96PG8 261 aaPredicted RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 DAZ1Q9NQZ3 744 aaKnown RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 DAZ3Q9NR90 486 aaKnown RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 TIMM17BO60830 172 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 NDUFA3O95167 84 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 CRIP2P52943 208 aaPredicted RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 CCL8P80075 99 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 ERCC8Q13216 396 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 POM121L12Q8N7R1 296 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 CYSTM1Q9H1C7 97 aa3.06□□□□□ -1.92
RDH11-204ENST00000553578 AMMECR1Q9Y4X0 333 aaPredicted RBP3.06□□□□□ -1.92
RDH11-204ENST00000553578 IGKV1-6A0A0C4DH72 117 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 COL8A2P25067 703 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 DAD1P61803 113 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 SERP2Q8N6R1 65 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 COPS9Q8WXC6 57 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 TMEM167BQ9NRX6 74 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 RNF7Q9UBF6 113 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 SERP1Q9Y6X1 66 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 CACNA1BQ00975 2339 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 FAM222AQ5U5X8 452 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 TMEM190Q8WZ59 177 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 C11orf52Q96A22 123 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGF2BP2-AS1Q96M15 143 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 KAAG1Q9UBP8 84 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 CACNA1HO95180 2353 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 PCNX1Q96RV3 2341 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 PKDREJQ9NTG1 2253 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 TRAV40A0A0B4J280 105 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGKV1D-13A0A0B4J2D9 117 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGHV4-61A0A0C4DH41 118 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGHV4-59P01825 116 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 IGKV1-13P0DP09 117 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 LINC00643Q86TS7 51 aa3.05□□□□□ -1.92
RDH11-204ENST00000553578 C9orf106Q8NAJ2 232 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms