RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A0A0J9YX75 114 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 K7EQG2 157 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 GNRH2O43555 120 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
SHMT2-205ENST00000553474 TAL2Q16559 108 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 SCGB3A1Q96QR1 104 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 HIVEP1P15822 2718 aa9.66□□□□□ -0.86
SHMT2-205ENST00000553474 C9orf118A6NHY6 69 aa9.65□□□□□ -0.86
SHMT2-205ENST00000553474 ERASQ7Z444 233 aa9.65□□□□□ -0.86
SHMT2-205ENST00000553474 MGPP08493 103 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 DEFB1P60022 68 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 GTF2H5Q6ZYL4 71 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 SYT8Q8NBV8 401 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 NEXN-AS1Q8NBZ9 246 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 MUC4Q99102 2169 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 TMEM160Q9NX00 188 aa9.65□□□□□ -0.87
SHMT2-205ENST00000553474 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 LINC00315P59091 139 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 KRTAP1-1Q07627 177 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
SHMT2-205ENST00000553474 TRBV25-1A0A075B6N4 114 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 TRBV6-5A0A0K0K1A5 114 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 LINC01619G3V211 115 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 CD7P09564 240 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 SRD5A1P18405 259 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 FOXI2Q6ZQN5 318 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
SHMT2-205ENST00000553474 TRAV2A0A0B4J234 112 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 VCYO14598 125 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 POLR2KP53803 58 aaKnown RBP9.63□□□□□ -0.87
SHMT2-205ENST00000553474 GTSCR1Q86UQ5 136 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 Q8N2B8 174 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 WFDC12Q8WWY7 111 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 CSTL1Q9H114 145 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 CYSLTR1Q9Y271 337 aa9.63□□□□□ -0.87
SHMT2-205ENST00000553474 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
SHMT2-205ENST00000553474 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
SHMT2-205ENST00000553474 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
SHMT2-205ENST00000553474 LY6G6DO95868 133 aa9.62□□□□□ -0.87
SHMT2-205ENST00000553474 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
SHMT2-205ENST00000553474 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
SHMT2-205ENST00000553474 GAGE10A6NGK3 116 aa9.61□□□□□ -0.87
SHMT2-205ENST00000553474 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-205ENST00000553474 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
SHMT2-205ENST00000553474 TEX29Q8N6K0 151 aa9.61□□□□□ -0.87
SHMT2-205ENST00000553474 TMEM141Q96I45 108 aa9.61□□□□□ -0.87
SHMT2-205ENST00000553474 HIVEP2P31629 2446 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 IGHV1OR15-1A0A075B7D0 117 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 OR11H12B2RN74 326 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 SMIM13P0DJ93 91 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 EDN2P20800 178 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 OR11H2Q8NH07 326 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 MTORP42345 2549 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 TCTAP57738 103 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 SUMO4Q6EEV6 95 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 CEND1Q8N111 149 aa9.6□□□□□ -0.87
SHMT2-205ENST00000553474 A8MTW9 85 aa9.59□□□□□ -0.87
SHMT2-205ENST00000553474 E9PLD3 99 aa9.59□□□□□ -0.87
SHMT2-205ENST00000553474 RIPPLY3P57055 190 aa9.59□□□□□ -0.87
SHMT2-205ENST00000553474 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
SHMT2-205ENST00000553474 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
SHMT2-205ENST00000553474 TEP1Q99973 2627 aaKnown RBP9.59□□□□□ -0.87
SHMT2-205ENST00000553474 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 GCSHP23434 173 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 PEMTQ9UBM1 199 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 ZNF256Q9Y2P7 627 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-205ENST00000553474 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-205ENST00000553474 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 F5H697 171 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 K7EP34 96 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 HOXA3O43365 443 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-205ENST00000553474 RHOHQ15669 191 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
SHMT2-205ENST00000553474 Q8N1Y9 231 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
SHMT2-205ENST00000553474 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
SHMT2-205ENST00000553474 MYMXA0A1B0GTQ4 84 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 A0A1W2PPM0 123 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 H3BUT2 72 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 SPRY2O43597 315 aa9.57□□□□□ -0.88
SHMT2-205ENST00000553474 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms