RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 PRELID3AQ96N28 172 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
PSEN1-206ENST00000553447 X6R8D5 127 aa12.66□□□□□ -0.38
PSEN1-206ENST00000553447 A0A087WWL8 130 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 CRYGDP07320 174 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
PSEN1-206ENST00000553447 BAGE3Q86Y29 109 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 RASL10AQ92737 203 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 MRAP2Q96G30 205 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 NDUFAF3Q9BU61 184 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 SAMD10Q9BYL1 202 aa12.65□□□□□ -0.38
PSEN1-206ENST00000553447 NACAE9PAV3 2078 aa12.65□□□□□ -0.39
PSEN1-206ENST00000553447 A8MWV9 139 aa12.64□□□□□ -0.39
PSEN1-206ENST00000553447 GAS8-AS1O95177 125 aa12.64□□□□□ -0.39
PSEN1-206ENST00000553447 HOXA5P20719 270 aa12.64□□□□□ -0.39
PSEN1-206ENST00000553447 Q6ZWC4 215 aa12.64□□□□□ -0.39
PSEN1-206ENST00000553447 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 LOC105371267A0A1B0GV96 52 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 RNF183Q96D59 192 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 OVOL2Q9BRP0 275 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
PSEN1-206ENST00000553447 LAMTOR2Q9Y2Q5 125 aa12.63□□□□□ -0.39
PSEN1-206ENST00000553447 DNAH3Q8TD57 4116 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 RS1O15537 224 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 NPYP01303 97 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-206ENST00000553447 LINC00310P59036 64 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
PSEN1-206ENST00000553447 SERF1AO75920 110 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 KRTAP21-3Q3LHN1 58 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 SUMO4Q6EEV6 95 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 Q6ZTI0 123 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 HIST3H2BBQ8N257 126 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 NRACQ8N912 160 aa12.61□□□□□ -0.39
PSEN1-206ENST00000553447 F5H697 171 aa12.6□□□□□ -0.39
PSEN1-206ENST00000553447 NUPR1O60356 82 aa12.6□□□□□ -0.39
PSEN1-206ENST00000553447 ZNF56Q15929 161 aa12.6□□□□□ -0.39
PSEN1-206ENST00000553447 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
PSEN1-206ENST00000553447 RHODO00212 210 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
PSEN1-206ENST00000553447 ESDP10768 282 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 NIT1Q86X76 327 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 URB1-AS1Q96HZ7 61 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 MAP1LC3AQ9H492 121 aa12.59□□□□□ -0.39
PSEN1-206ENST00000553447 K7EIL1 84 aa12.58□□□□□ -0.4
PSEN1-206ENST00000553447 MIFP14174 115 aa12.58□□□□□ -0.4
PSEN1-206ENST00000553447 EMP1P54849 157 aa12.58□□□□□ -0.4
PSEN1-206ENST00000553447 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
PSEN1-206ENST00000553447 PKD1L1Q8TDX9 2849 aa12.58□□□□□ -0.4
PSEN1-206ENST00000553447 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 TRAV4A0A0B4J268 109 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 IGHV4-28A0A0C4DH34 117 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 PPP1R17O96001 155 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 RNASEKQ6P5S7 137 aaKnown RBP12.57□□□□□ -0.4
PSEN1-206ENST00000553447 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
PSEN1-206ENST00000553447 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
PSEN1-206ENST00000553447 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 IFITM10A6NMD0 228 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 PRSS47A8MTI9 375 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 GAGE7O76087 117 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 S100A2P29034 98 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 ZFP2Q6ZN57 461 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 Q8NAQ8 132 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 PRSS3P2Q8NHM4 247 aa12.56□□□□□ -0.4
PSEN1-206ENST00000553447 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
PSEN1-206ENST00000553447 M0QY20 66 aa12.55□□□□□ -0.4
PSEN1-206ENST00000553447 LINC00614P0C842 121 aa12.55□□□□□ -0.4
PSEN1-206ENST00000553447 IFI27P40305 119 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-206ENST00000553447 LINC00612Q8N6U2 182 aa12.55□□□□□ -0.4
PSEN1-206ENST00000553447 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
PSEN1-206ENST00000553447 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
PSEN1-206ENST00000553447 FA2HQ7L5A8 372 aa12.54□□□□□ -0.4
PSEN1-206ENST00000553447 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
PSEN1-206ENST00000553447 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
PSEN1-206ENST00000553447 RETNQ9HD89 108 aa12.54□□□□□ -0.4
PSEN1-206ENST00000553447 LYRM9A8MSI8 78 aa12.53□□□□□ -0.4
PSEN1-206ENST00000553447 H7C1H1 209 aa12.53□□□□□ -0.4
PSEN1-206ENST00000553447 HSBP1O75506 76 aa12.53□□□□□ -0.4
PSEN1-206ENST00000553447 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
PSEN1-206ENST00000553447 Q6ZSN1 163 aa12.53□□□□□ -0.4
PSEN1-206ENST00000553447 HIST1H2BLQ99880 126 aa12.53□□□□□ -0.4
PSEN1-206ENST00000553447 NXT2Q9NPJ8 142 aaKnown RBP12.53□□□□□ -0.4
PSEN1-206ENST00000553447 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 TRBV6-5A0A0K0K1A5 114 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 DEFB4AO15263 64 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 CIDEAO60543 219 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 PMCHP20382 165 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 FAM222AQ5U5X8 452 aa12.52□□□□□ -0.41
PSEN1-206ENST00000553447 Q8N8P6 123 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms