RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 SNAI2O43623 268 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 CRYGDP07320 174 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 Q6ZSN1 163 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.73
SHMT2-204ENST00000553324 PKD1P98161 4303 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 A0A087WWL8 130 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 IGLV2-8P01709 118 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 NKX2-5P52952 324 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-204ENST00000553324 TNP2Q05952 138 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 LELP1Q5T871 98 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
SHMT2-204ENST00000553324 A0A087WWC5 75 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 P01737 135 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 LINC00315P59091 139 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 GAGE1Q13065 139 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 GAGE4Q13068 117 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 GAGE5Q13069 117 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 OR2D3Q8NGH3 330 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 PKHD1P08F94 4074 aa10.44□□□□□ -0.74
SHMT2-204ENST00000553324 F2Z2F3 143 aa10.43□□□□□ -0.74
SHMT2-204ENST00000553324 RAB4BP61018 213 aa10.43□□□□□ -0.74
SHMT2-204ENST00000553324 LINC01556Q5JQF7 62 aa10.43□□□□□ -0.74
SHMT2-204ENST00000553324 C14orf178Q8N769 122 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-204ENST00000553324 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
SHMT2-204ENST00000553324 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
SHMT2-204ENST00000553324 SMIM17P0DL12 118 aa10.42□□□□□ -0.74
SHMT2-204ENST00000553324 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
SHMT2-204ENST00000553324 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
SHMT2-204ENST00000553324 CACNG7P62955 275 aa10.41□□□□□ -0.74
SHMT2-204ENST00000553324 RPL36AP83881 106 aaKnown RBP10.41□□□□□ -0.74
SHMT2-204ENST00000553324 FER1L6-AS1Q8NA97 138 aa10.41□□□□□ -0.74
SHMT2-204ENST00000553324 RPL36ALQ969Q0 106 aaKnown RBP10.41□□□□□ -0.74
SHMT2-204ENST00000553324 EIF5A2Q9GZV4 153 aaKnown RBP10.41□□□□□ -0.74
SHMT2-204ENST00000553324 MSRB1Q9NZV6 116 aa10.41□□□□□ -0.74
SHMT2-204ENST00000553324 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
SHMT2-204ENST00000553324 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-204ENST00000553324 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
SHMT2-204ENST00000553324 TPPP3Q9BW30 176 aa10.4□□□□□ -0.74
SHMT2-204ENST00000553324 EREGO14944 169 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 SSTP61278 116 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 ZNF56Q15929 161 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 WDR73Q6P4I2 378 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 Q6ZRN7 208 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-204ENST00000553324 NUDT10Q8NFP7 164 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 OCC1Q8TAD7 63 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 NUDT11Q96G61 164 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 DNAH11Q96DT5 4516 aa10.39□□□□□ -0.75
SHMT2-204ENST00000553324 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
SHMT2-204ENST00000553324 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
SHMT2-204ENST00000553324 F5H697 171 aa10.38□□□□□ -0.75
SHMT2-204ENST00000553324 GZMBP10144 247 aa10.38□□□□□ -0.75
SHMT2-204ENST00000553324 Q9UF83 564 aa10.38□□□□□ -0.75
SHMT2-204ENST00000553324 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
SHMT2-204ENST00000553324 IBA57-AS1B1ANH7 110 aa10.37□□□□□ -0.75
SHMT2-204ENST00000553324 TOR2AQ5JU69 321 aa10.37□□□□□ -0.75
SHMT2-204ENST00000553324 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
SHMT2-204ENST00000553324 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 CEBPGP53567 150 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 ERVFC1-1P60608 527 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 UBE2D3P61077 147 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 UBE2D2P62837 147 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
SHMT2-204ENST00000553324 TNFRSF18Q9Y5U5 241 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 KIF25-AS1Q9Y6Z4 181 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 URGCP-MRPS24S4R325 110 aa10.36□□□□□ -0.75
SHMT2-204ENST00000553324 H7C1H1 209 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 K7EN84 100 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 LAGE3Q14657 143 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 SPATA12Q7Z6I5 190 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
SHMT2-204ENST00000553324 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
SHMT2-204ENST00000553324 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 NTF3P20783 257 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 TMEM97Q5BJF2 176 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 KCNIP4Q6PIL6 250 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 FAM231DQ6ZW35 169 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 DAZ4Q86SG3 579 aaKnown RBP10.34□□□□□ -0.75
SHMT2-204ENST00000553324 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 SMIM7Q9BQ49 75 aa10.34□□□□□ -0.75
SHMT2-204ENST00000553324 DAZ3Q9NR90 486 aaKnown RBP10.34□□□□□ -0.75
SHMT2-204ENST00000553324 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms