RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MPV17L2Q567V2 206 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 SAPCD1Q5SSQ6 148 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 OR11H4Q8NGC9 324 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 CCDC32Q9BV29 185 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 ARL2-SNX15V9GYD0 113 aa5.81□□□□□ -1.48
SYNE2-209ENST00000553308 FABP5P3A8MUU1 101 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 M0R036 132 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 ANGP03950 147 aaKnown RBP5.8□□□□□ -1.48
SYNE2-209ENST00000553308 ARMS2P0C7Q2 107 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 RPL36AP83881 106 aaKnown RBP5.8□□□□□ -1.48
SYNE2-209ENST00000553308 DGAT2L7PQ6IED9 249 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 MZT2BQ6NZ67 158 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 SDIM1Q6ZPB5 146 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 SUN5Q8TC36 379 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 RPL36ALQ969Q0 106 aaKnown RBP5.8□□□□□ -1.48
SYNE2-209ENST00000553308 RAB24Q969Q5 203 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 ZC2HC1AQ96GY0 325 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 SFRP2Q96HF1 295 aa5.8□□□□□ -1.48
SYNE2-209ENST00000553308 TRBV7-3A0A075B6L6 115 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 TRBV6-8A0A0A6YYG3 113 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 A0A0D9SG52 128 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 TRBV10-1A0A0K0K1A3 114 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 GRIFINA4D1Z8 144 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 KRBOX1C9JBD0 128 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 M0R381 172 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 PET100P0DJ07 73 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 ODF1Q14990 250 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 CLPSL2Q6UWE3 100 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 Q86TA4 180 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 ENKURQ8TC29 256 aa5.79□□□□□ -1.48
SYNE2-209ENST00000553308 SH2D1AO60880 128 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 PTTG1O95997 202 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 CRIP1P50238 77 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 RPL19P84098 196 aaKnown RBP5.78□□□□□ -1.48
SYNE2-209ENST00000553308 CIRBPQ14011 172 aaKnown RBP5.78□□□□□ -1.48
SYNE2-209ENST00000553308 MIAQ16674 131 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 HSD17B11Q8NBQ5 300 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 PHLDA3Q9Y5J5 127 aa5.78□□□□□ -1.48
SYNE2-209ENST00000553308 TMSB15BA0A087X1C1 80 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 CXorf1O96002 111 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 TPT1P13693 172 aaKnown RBP5.77□□□□□ -1.49
SYNE2-209ENST00000553308 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 CHCHD5Q9BSY4 110 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 TMEM167BQ9NRX6 74 aa5.77□□□□□ -1.49
SYNE2-209ENST00000553308 A0A087WYN8 130 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 A0A1W2PRE2 83 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 INMT-MINDY4F8WBC2 141 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 PEX7O00628 323 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 IFNA7P01567 189 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 ZNF56Q15929 161 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 ZFP82Q8N141 532 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
SYNE2-209ENST00000553308 PHOX2AO14813 284 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 SSNA1O43805 119 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 ATP6V0CP27449 155 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 UBE2G2P60604 165 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 CNBPP62633 177 aaKnown RBP5.75□□□□□ -1.49
SYNE2-209ENST00000553308 RBX1P62877 108 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 GAGE6Q13070 117 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 LINC01559Q495D7 138 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 FAM162BQ5T6X4 162 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 PRR27Q6MZM9 219 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 LINC00269Q8N2A0 174 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 PSMG3Q9BT73 122 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-209ENST00000553308 LRP2P98164 4655 aa5.75□□□□□ -1.49
SYNE2-209ENST00000553308 IGLV10-54A0A075B6I4 117 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 hDV102S1A0JD36 115 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 SLPIP03973 132 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 RAB4BP61018 213 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 PKIAP61925 76 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 COX8CQ7Z4L0 72 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 CLRN3Q8NCR9 226 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 LINC01600Q96MT4 127 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 ACTR3CQ9C0K3 210 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-209ENST00000553308 DPH3P1Q9H4G8 78 aa5.74□□□□□ -1.49
SYNE2-209ENST00000553308 IGHV3-64A0A075B6Q5 118 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 UPK1BO75841 260 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 MBP02144 154 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 SERF2P84101 59 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 IFITM3Q01628 133 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 ZNF726P1Q15940 193 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 ZNF674Q2M3X9 581 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 OR10AG1Q8NH19 301 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 RNF185Q96GF1 192 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 MARVELD1Q9BSK0 173 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 ZFP30Q9Y2G7 519 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
SYNE2-209ENST00000553308 TNXBP22105 4242 aa5.72□□□□□ -1.49
SYNE2-209ENST00000553308 FAM74A7A6NL05 159 aa5.72□□□□□ -1.49
SYNE2-209ENST00000553308 DEFA3P59666 94 aa5.72□□□□□ -1.49
SYNE2-209ENST00000553308 REG3AQ06141 175 aa5.72□□□□□ -1.49
SYNE2-209ENST00000553308 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms