RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 NRACQ8N912 160 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 S4R3C0 116 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 MED13LQ71F56 2210 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 CTSGP08311 255 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 PRB4P10163 310 aaPredicted RBP5.62□□□□□ -1.51
BEST3-212ENST00000553096 MALP21145 153 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 MAPKAPK5-AS1Q8N8E1 139 aa5.62□□□□□ -1.51
BEST3-212ENST00000553096 HOXA3O43365 443 aaPredicted RBP5.61□□□□□ -1.51
BEST3-212ENST00000553096 CRYGDP07320 174 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 FOXI1Q12951 378 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 Q8N6K4 173 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 MAP1AP78559 2803 aaPredicted RBP5.61□□□□□ -1.51
BEST3-212ENST00000553096 A0A1B0GX51 115 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 LINC01549A6NIU2 74 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 GATA1P15976 413 aaPredicted RBP5.61□□□□□ -1.51
BEST3-212ENST00000553096 SPANXN1Q5VSR9 72 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 TMEM86BQ8N661 226 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 ZNRF2Q8NHG8 242 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 DLX4Q92988 240 aaPredicted RBP5.61□□□□□ -1.51
BEST3-212ENST00000553096 CARD19Q96LW7 228 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 APOMO95445 188 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 HLA-DMBP28068 263 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 ERCC8Q13216 396 aa5.61□□□□□ -1.51
BEST3-212ENST00000553096 NOTCH2Q04721 2471 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 FBN2P35556 2912 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 PPP1R17O96001 155 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 LMO4P61968 165 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 GAGE2BQ13066 116 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 GAGE2EQ4V326 116 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 TOMM6Q96B49 74 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 BPESC1Q9GZL8 116 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 RETNQ9HD89 108 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 LENEPQ9Y5L5 61 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 ITPR2Q14571 2701 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 UNC79Q9P2D8 2635 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 IGHV7-4-1A0A0J9YVY3 117 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 CYSRT1A8MQ03 144 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 BUB3O43684 328 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 TRGV3P03979 118 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 EFNA4P52798 201 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 EBI3Q14213 229 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 KLK9Q2XQG4 91 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 IGFL4Q6B9Z1 124 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 MDFICQ9P1T7 246 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 KLK9Q9UKQ9 250 aa5.6□□□□□ -1.51
BEST3-212ENST00000553096 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 MINOS1Q5TGZ0 78 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 C9orf47Q6ZRZ4 202 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 AGPAT4-IT1Q9H0P7 198 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 MINOS1-NBL1R4GNA1 71 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 A8MZ25 164 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 PRAC2D3DTV9 90 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 M0R381 172 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 IGHV3-23P01764 117 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 IGHV4-39P01824 125 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 CFAP126Q5VTH2 177 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 AMTNQ6UX39 209 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 NEXN-AS1Q8NBZ9 246 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
BEST3-212ENST00000553096 ABCA12Q86UK0 2595 aa5.59□□□□□ -1.52
BEST3-212ENST00000553096 TEX15Q9BXT5 2789 aa5.59□□□□□ -1.52
BEST3-212ENST00000553096 FAM236DA0A1B0GTK5 79 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 LGALS1P09382 135 aaKnown RBP5.58□□□□□ -1.52
BEST3-212ENST00000553096 FAM236CP0DP71 79 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 HERVK_113P61574 105 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
BEST3-212ENST00000553096 Q5XG85 94 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 MED14OSP0DP75 135 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
BEST3-212ENST00000553096 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
BEST3-212ENST00000553096 METTL26Q96S19 204 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 C11orf21Q9P2W6 132 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 KLK5Q9Y337 293 aaPredicted RBP5.58□□□□□ -1.52
BEST3-212ENST00000553096 IGHV7-81A0A0B4J1V7 117 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 FAM236AA0A1B0GUQ0 79 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 FAM236BA0A1B0GV22 79 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 HERVK_113P63121 156 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 SCGB1D4Q6XE38 83 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 RNF182Q8N6D2 247 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
BEST3-212ENST00000553096 MAST4O15021 2626 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 NAV2Q8IVL1 2488 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 TRAV26-2A0A0B4J265 109 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 UBE2D1P51668 147 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 SRSF9Q13242 221 aaKnown RBP eCLIP5.57□□□□□ -1.52
BEST3-212ENST00000553096 TRPT1Q86TN4 253 aaKnown RBP5.57□□□□□ -1.52
BEST3-212ENST00000553096 Q8N9W7 124 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 TRAV4A0A0B4J268 109 aa5.57□□□□□ -1.52
BEST3-212ENST00000553096 IGHV1-69DA0A0B4J2H0 117 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms