RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 A0A087WWC5 75 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 BORCS7-ASMTA0A0B4J1R7 106 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 RBFOX3A6NFN3 312 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 M0R381 172 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 URGCP-MRPS24S4R325 110 aa7.55□□□□□ -1.2
NEK3-204ENST00000552973 RHODO00212 210 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
NEK3-204ENST00000552973 GIPP09681 153 aaPredicted RBP7.54□□□□□ -1.2
NEK3-204ENST00000552973 AKR1C8PQ5T2L2 129 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 Q6ZSA8 131 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 NIT1Q86X76 327 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 HIST1H2BAQ96A08 127 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
NEK3-204ENST00000552973 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
NEK3-204ENST00000552973 TPT1P13693 172 aaKnown RBP7.53□□□□□ -1.2
NEK3-204ENST00000552973 UBE2G1P62253 170 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 FAM162BQ5T6X4 162 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 SCXQ7RTU7 201 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 RMI2Q96E14 147 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 ZFP30Q9Y2G7 519 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
NEK3-204ENST00000552973 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 A0A087WX48 190 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 TMEM262E9PQX1 116 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 PTTG1O95997 202 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 DNLZQ5SXM8 178 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 Q8N976 141 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
NEK3-204ENST00000552973 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
NEK3-204ENST00000552973 RPL36AP83881 106 aaKnown RBP7.51□□□□□ -1.21
NEK3-204ENST00000552973 ZNF674Q2M3X9 581 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 COX8CQ7Z4L0 72 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 ZFP82Q8N141 532 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 RPL36ALQ969Q0 106 aaKnown RBP7.51□□□□□ -1.21
NEK3-204ENST00000552973 FMC1Q96HJ9 113 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 CYTL1Q9NRR1 136 aa7.51□□□□□ -1.21
NEK3-204ENST00000552973 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
NEK3-204ENST00000552973 MUC21A0A0G2JKD1 596 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 MUC21A0A140T8X8 626 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 ARPC5O15511 151 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 LTAP01374 205 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 SEC11BP0C7V7 166 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 AKR1C3P42330 323 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 FHITP49789 147 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 UBE2D3P61077 147 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 SSTP61278 116 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 UBE2D2P62837 147 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 RPL19P84098 196 aaKnown RBP7.5□□□□□ -1.21
NEK3-204ENST00000552973 DEFB104AQ8WTQ1 72 aa7.5□□□□□ -1.21
NEK3-204ENST00000552973 TRBV7-3A0A075B6L6 115 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 A0A1B0GV50 99 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
NEK3-204ENST00000552973 G3V3Q6 166 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 PAGE4O60829 102 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 ELOBQ15370 118 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 C15orf54Q8N8G6 183 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 STOML3Q8TAV4 291 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
NEK3-204ENST00000552973 TRBV6-1A0A0K0K1D8 114 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 SMLR1H3BR10 107 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 ZNF56Q15929 161 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
NEK3-204ENST00000552973 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 CRPP02741 224 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 Q0VG73 95 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 ATRAIDQ6UW56 229 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
NEK3-204ENST00000552973 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 F5H697 171 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 IGLV2-8P01709 118 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 HLA-DQA1P01909 254 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
NEK3-204ENST00000552973 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
NEK3-204ENST00000552973 RAB4BP61018 213 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 PRR27Q6MZM9 219 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 BAGE2Q86Y30 109 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 OR10G8Q8NGN5 311 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 SFT2D1Q8WV19 159 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.22
NEK3-204ENST00000552973 BATF3Q9NR55 127 aa7.46□□□□□ -1.22
NEK3-204ENST00000552973 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.22
NEK3-204ENST00000552973 SPANXN1Q5VSR9 72 aa7.45□□□□□ -1.22
NEK3-204ENST00000552973 CLPSL2Q6UWE3 100 aa7.45□□□□□ -1.22
NEK3-204ENST00000552973 FAM213BQ8TBF2 198 aa7.45□□□□□ -1.22
NEK3-204ENST00000552973 TCEAL7Q9BRU2 100 aa7.45□□□□□ -1.22
NEK3-204ENST00000552973 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms