RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 LEPROTO15243 131 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 RNASE1P07998 156 aaKnown RBP4.02□□□□□ -1.77
CCNT1-204ENST00000551989 ELANEP08246 267 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 CD7P09564 240 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 LGALS3P17931 250 aaKnown RBP4.02□□□□□ -1.77
CCNT1-204ENST00000551989 MALP21145 153 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 PSMB8P28062 276 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 UBE2D3P61077 147 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 UBE2D2P62837 147 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 RPL11P62913 178 aaKnown RBP4.02□□□□□ -1.77
CCNT1-204ENST00000551989 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 SUMO4Q6EEV6 95 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 TMEM219Q86XT9 240 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 SLC25A29Q8N8R3 303 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 RPL39LQ96EH5 51 aaKnown RBP4.02□□□□□ -1.77
CCNT1-204ENST00000551989 CITED1Q99966 193 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 C1QTNF4Q9BXJ3 329 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 PRORYQ9H606 182 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
CCNT1-204ENST00000551989 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 PYGO1Q9Y3Y4 419 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 BDP1A6H8Y1 2624 aa4.02□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV1OR15-1A0A075B7D0 117 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 TRAV25A0A0B4J276 109 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 A0A0B4J2C4 111 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV3-16A0A0C4DH30 117 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV4-61A0A0C4DH41 118 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 A0A0J9YY99 117 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 A0A1B0GV72 72 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 TMEM262E9PQX1 116 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 I3L3M4 83 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 K7ERJ3 54 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 RHODO00212 210 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 CRYGDP07320 174 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 TCTEX1D4Q5JR98 221 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 CFAP126Q5VTH2 177 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
CCNT1-204ENST00000551989 SBSPONQ8IVN8 264 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 C10orf126Q8N4M7 172 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 RNF183Q96D59 192 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
CCNT1-204ENST00000551989 LINC00467Q9BRT7 94 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 KLK15Q9H2R5 256 aa4.01□□□□□ -1.77
CCNT1-204ENST00000551989 PTPRZ1P23471 2315 aaPredicted RBP4.01□□□□□ -1.77
CCNT1-204ENST00000551989 TPRP12270 2363 aaKnown RBP4□□□□□ -1.77
CCNT1-204ENST00000551989 A8MWV9 139 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 F5H697 171 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 J3QQQ9 107 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 M0QY20 66 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 GNRH2O43555 120 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 APOMO95445 188 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 TRBV12-3P01733 135 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV3-30P01768 117 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 P0DMU3 169 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 FAM231AP0DMU4 169 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 FAM231CP0DMU5 169 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV3-30-5P0DP03 117 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 PRB4P10163 310 aaPredicted RBP4□□□□□ -1.77
CCNT1-204ENST00000551989 ATP5J2P56134 94 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 TIRAPP58753 221 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 SMAGPQ0VAQ4 97 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 ZNF56Q15929 161 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 BRD3OSQ6XYD6 125 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 TEN1Q86WV5 123 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 NDUFA11Q86Y39 141 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 PPDPFLQ8WWR9 84 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 COPS9Q8WXC6 57 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 DNAJC30Q96LL9 226 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 FREM2Q5SZK8 3169 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 ABCA2Q9BZC7 2435 aa4□□□□□ -1.77
CCNT1-204ENST00000551989 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TIMM17BO60830 172 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TSPAN13O95857 204 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TSHBP01222 138 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV3-11P01762 117 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV4-38-2P0DP08 117 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 FOXI1Q12951 378 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 LY6EQ16553 131 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TMEM170BQ5T4T1 132 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TEX29Q8N6K0 151 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 LINC01356Q8N9X3 169 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 UBE2E2Q96LR5 201 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 SPAG8Q99932 426 aaPredicted RBP3.99□□□□□ -1.77
CCNT1-204ENST00000551989 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 SPANXA1Q9NS26 97 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 PRO1854Q9UHT4 67 aa3.99□□□□□ -1.77
CCNT1-204ENST00000551989 TRAV12-3A0A0B4J271 114 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 A0A0J9YXY3 114 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 F6UB75 175 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 C19orf84I3L1E1 186 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 IFITM1P13164 125 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 MRPS36P82909 103 aaKnown RBP3.98□□□□□ -1.77
CCNT1-204ENST00000551989 ZNF415Q09FC8 603 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 WFDC2Q14508 124 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms