RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 LINC00862A6NCI5 91 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 K7EN84 100 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 SPANXN1Q5VSR9 72 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 FER1L6-AS1Q8NA97 138 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 NUDT10Q8NFP7 164 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 NUDT11Q96G61 164 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 JPT2Q9H910 190 aa11.97□□□□□ -0.49
CDK4-208ENST00000551706 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 IGLC6P0CF74 106 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 UFSP1Q6NVU6 142 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 COMMD7Q86VX2 200 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 SAMD10Q9BYL1 202 aa11.96□□□□□ -0.49
CDK4-208ENST00000551706 RPP21Q9H633 154 aaKnown RBP11.96□□□□□ -0.49
CDK4-208ENST00000551706 DYNC1H1Q14204 4646 aaKnown RBP11.95□□□□□ -0.5
CDK4-208ENST00000551706 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
CDK4-208ENST00000551706 A0A1W2PPQ1 181 aa11.95□□□□□ -0.5
CDK4-208ENST00000551706 F2Z2F3 143 aa11.95□□□□□ -0.5
CDK4-208ENST00000551706 GZMBP10144 247 aa11.95□□□□□ -0.5
CDK4-208ENST00000551706 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
CDK4-208ENST00000551706 RNASE7Q9H1E1 156 aaKnown RBP11.95□□□□□ -0.5
CDK4-208ENST00000551706 CRYGDP07320 174 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 CACNG7P62955 275 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 FAM231DQ6ZW35 169 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 TPPP3Q9BW30 176 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 Q9H8V8 135 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 DNAH11Q96DT5 4516 aa11.94□□□□□ -0.5
CDK4-208ENST00000551706 A0A087WWL8 130 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 M0R2N4 97 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 ERVFC1-1P60608 527 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 AP1S3Q96PC3 154 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 DNAH17Q9UFH2 4485 aa11.93□□□□□ -0.5
CDK4-208ENST00000551706 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
CDK4-208ENST00000551706 GATCO43716 136 aaKnown RBP11.92□□□□□ -0.5
CDK4-208ENST00000551706 Q6ZR54 194 aa11.92□□□□□ -0.5
CDK4-208ENST00000551706 Q6ZSN1 163 aa11.92□□□□□ -0.5
CDK4-208ENST00000551706 MUC21A0A0G2JKD1 596 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 MUC21A0A140T8X8 626 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 C9JQL5 133 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 CTRLP40313 264 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 TIRAPP58753 221 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 TMEM241Q24JQ0 296 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 WDR73Q6P4I2 378 aa11.91□□□□□ -0.5
CDK4-208ENST00000551706 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 A8MWL6 223 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 RAB4BP61018 213 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 SSTP61278 116 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 SRSF3P84103 164 aaKnown RBP11.9□□□□□ -0.5
CDK4-208ENST00000551706 CT83Q5H943 113 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 UQCC3Q6UW78 93 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
CDK4-208ENST00000551706 PKD1P98161 4303 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 TRBV10-1A0A0K0K1A3 114 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 SIVA1O15304 175 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 SOHLH1Q5JUK2 328 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
CDK4-208ENST00000551706 OSTCQ9NRP0 149 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
CDK4-208ENST00000551706 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 ZNF56Q15929 161 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 C15orf54Q8N8G6 183 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 ATP6V0E2Q8NHE4 81 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
CDK4-208ENST00000551706 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 GAGE1Q13065 139 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 GAGE4Q13068 117 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 GAGE5Q13069 117 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 GAGE13Q4V321 117 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 HERC1Q15751 4861 aa11.87□□□□□ -0.51
CDK4-208ENST00000551706 F5H697 171 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 NTF3P20783 257 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
CDK4-208ENST00000551706 RPL36AP83881 106 aaKnown RBP11.86□□□□□ -0.51
CDK4-208ENST00000551706 C1orf134Q5TEV5 83 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 GTSF1Q8WW33 167 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 RPL36ALQ969Q0 106 aaKnown RBP11.86□□□□□ -0.51
CDK4-208ENST00000551706 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
CDK4-208ENST00000551706 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 PRSS29PA6NIE9 313 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 FOXA3P55318 350 aaPredicted RBP11.85□□□□□ -0.51
CDK4-208ENST00000551706 TWIST1Q15672 202 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 ADIRFQ15847 76 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 GFRA4Q9GZZ7 299 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 MSRB1Q9NZV6 116 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 HSPG2P98160 4391 aa11.85□□□□□ -0.51
CDK4-208ENST00000551706 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
CDK4-208ENST00000551706 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms