RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SEC11BP0C7V7 166 aa14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 UBE2G2P60604 165 aa14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 RPL7L1Q6DKI1 246 aaKnown RBP14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 HIST1H2BAQ96A08 127 aa14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 ZC2HC1AQ96GY0 325 aa14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 KLK12Q9UKR0 248 aa14.22□□□□□ -0.13
SMARCC2-210ENST00000550519 IGKV2D-24A0A075B6R9 120 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 M0R036 132 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 FAM74A4Q5TZK3 123 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 OR11H4Q8NGC9 324 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 SFRP2Q96HF1 295 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 NKX6-2Q9C056 277 aaPredicted RBP14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 MED28Q9H204 178 aa14.21□□□□□ -0.13
SMARCC2-210ENST00000550519 GRIFINA4D1Z8 144 aa14.2□□□□□ -0.14
SMARCC2-210ENST00000550519 FAM74A7A6NL05 159 aa14.2□□□□□ -0.14
SMARCC2-210ENST00000550519 SH2D1AO60880 128 aa14.2□□□□□ -0.14
SMARCC2-210ENST00000550519 CHCHD7Q9BUK0 85 aa14.2□□□□□ -0.14
SMARCC2-210ENST00000550519 ZFP30Q9Y2G7 519 aa14.2□□□□□ -0.14
SMARCC2-210ENST00000550519 A0A087WWL8 130 aa14.19□□□□□ -0.14
SMARCC2-210ENST00000550519 KRTAP10-4P60372 401 aaPredicted RBP14.19□□□□□ -0.14
SMARCC2-210ENST00000550519 ATRAIDQ6UW56 229 aa14.19□□□□□ -0.14
SMARCC2-210ENST00000550519 CHAC1Q9BUX1 264 aa14.19□□□□□ -0.14
SMARCC2-210ENST00000550519 FAM162BQ5T6X4 162 aa14.18□□□□□ -0.14
SMARCC2-210ENST00000550519 INO80EQ8NBZ0 244 aaPredicted RBP14.18□□□□□ -0.14
SMARCC2-210ENST00000550519 UBE2WQ96B02 151 aa14.18□□□□□ -0.14
SMARCC2-210ENST00000550519 PHLDA3Q9Y5J5 127 aa14.18□□□□□ -0.14
SMARCC2-210ENST00000550519 A0A087WX48 190 aa14.17□□□□□ -0.14
SMARCC2-210ENST00000550519 BORCS7-ASMTA0A0B4J1R7 106 aa14.17□□□□□ -0.14
SMARCC2-210ENST00000550519 TRBV10-1A0A0K0K1A3 114 aa14.17□□□□□ -0.14
SMARCC2-210ENST00000550519 ELOBQ15370 118 aa14.17□□□□□ -0.14
SMARCC2-210ENST00000550519 M0R381 172 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 GIPP09681 153 aaPredicted RBP14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 TPT1P13693 172 aaKnown RBP14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 UBE2D3P61077 147 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 UBE2D2P62837 147 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 ZNF674Q2M3X9 581 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 LINC01559Q495D7 138 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 FMC1Q96HJ9 113 aa14.16□□□□□ -0.14
SMARCC2-210ENST00000550519 RPL36AP83881 106 aaKnown RBP14.15□□□□□ -0.14
SMARCC2-210ENST00000550519 CIRBP-AS1Q8TBR5 109 aa14.15□□□□□ -0.14
SMARCC2-210ENST00000550519 RPL36ALQ969Q0 106 aaKnown RBP14.15□□□□□ -0.14
SMARCC2-210ENST00000550519 TRBV7-3A0A075B6L6 115 aa14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 TRBV6-1A0A0K0K1D8 114 aa14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 PTTG1O95997 202 aa14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 Q0VG73 95 aa14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 ZFP82Q8N141 532 aa14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 LRP1Q07954 4544 aaKnown RBP14.14□□□□□ -0.15
SMARCC2-210ENST00000550519 FXYD6-FXYD2A0A087WZ82 144 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 TMSB15BA0A087X1C1 80 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 LTAP01374 205 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 UBE2G1P62253 170 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 AKR1C8PQ5T2L2 129 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 KCNIP4Q6PIL6 250 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 OR10G8Q8NGN5 311 aa14.13□□□□□ -0.15
SMARCC2-210ENST00000550519 MAP1LC3B2A6NCE7 125 aa14.11□□□□□ -0.15
SMARCC2-210ENST00000550519 FHITP49789 147 aa14.11□□□□□ -0.15
SMARCC2-210ENST00000550519 ENHOQ6UWT2 76 aa14.11□□□□□ -0.15
SMARCC2-210ENST00000550519 TCEAL7Q9BRU2 100 aa14.11□□□□□ -0.15
SMARCC2-210ENST00000550519 MAP1LC3BQ9GZQ8 125 aa14.11□□□□□ -0.15
SMARCC2-210ENST00000550519 TRBV6-8A0A0A6YYG3 113 aa14.1□□□□□ -0.15
SMARCC2-210ENST00000550519 C14orf177Q52M58 125 aa14.1□□□□□ -0.15
SMARCC2-210ENST00000550519 C1orf43Q9BWL3 253 aa14.1□□□□□ -0.15
SMARCC2-210ENST00000550519 TMEM262E9PQX1 116 aa14.09□□□□□ -0.15
SMARCC2-210ENST00000550519 OXTP01178 125 aa14.09□□□□□ -0.15
SMARCC2-210ENST00000550519 IGLV2-8P01709 118 aa14.09□□□□□ -0.15
SMARCC2-210ENST00000550519 SERTAD4-AS1Q5TG53 156 aa14.09□□□□□ -0.15
SMARCC2-210ENST00000550519 RAB4BP61018 213 aa14.08□□□□□ -0.16
SMARCC2-210ENST00000550519 PRR27Q6MZM9 219 aa14.08□□□□□ -0.16
SMARCC2-210ENST00000550519 NEXN-AS1Q8NBZ9 246 aa14.08□□□□□ -0.16
SMARCC2-210ENST00000550519 HMCN2Q8NDA2 5059 aa14.08□□□□□ -0.16
SMARCC2-210ENST00000550519 MPV17L2Q567V2 206 aa14.07□□□□□ -0.16
SMARCC2-210ENST00000550519 CST9LP1Q5W188 147 aa14.07□□□□□ -0.16
SMARCC2-210ENST00000550519 CYTL1Q9NRR1 136 aa14.07□□□□□ -0.16
SMARCC2-210ENST00000550519 G3V3Q6 166 aa14.06□□□□□ -0.16
SMARCC2-210ENST00000550519 AKR1C3P42330 323 aa14.06□□□□□ -0.16
SMARCC2-210ENST00000550519 C15orf54Q8N8G6 183 aa14.06□□□□□ -0.16
SMARCC2-210ENST00000550519 FAT3Q8TDW7 4589 aa14.05□□□□□ -0.16
SMARCC2-210ENST00000550519 CRPP02741 224 aa14.05□□□□□ -0.16
SMARCC2-210ENST00000550519 CXCL1P09341 107 aa14.05□□□□□ -0.16
SMARCC2-210ENST00000550519 OR10AG1Q8NH19 301 aa14.05□□□□□ -0.16
SMARCC2-210ENST00000550519 STOML3Q8TAV4 291 aa14.05□□□□□ -0.16
SMARCC2-210ENST00000550519 ZNF56Q15929 161 aa14.04□□□□□ -0.16
SMARCC2-210ENST00000550519 SSBP4Q9BWG4 385 aaPredicted RBP14.04□□□□□ -0.16
SMARCC2-210ENST00000550519 USP17L23D6RBM5 183 aa14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 SNAI2O43623 268 aa14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 PAGE4O60829 102 aa14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 ANGP03950 147 aaKnown RBP14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 RPL19P84098 196 aaKnown RBP14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 ZNF471Q9BX82 626 aaPredicted RBP14.03□□□□□ -0.16
SMARCC2-210ENST00000550519 S100A9P06702 114 aaKnown RBP14.02□□□□□ -0.17
SMARCC2-210ENST00000550519 PKIAP61925 76 aa14.02□□□□□ -0.17
SMARCC2-210ENST00000550519 MIAQ16674 131 aa14.02□□□□□ -0.17
SMARCC2-210ENST00000550519 CHCHD5Q9BSY4 110 aa14.02□□□□□ -0.17
SMARCC2-210ENST00000550519 MLST8Q9BVC4 326 aa14.02□□□□□ -0.17
SMARCC2-210ENST00000550519 NTM-AS1Q6ZSK4 140 aa14.01□□□□□ -0.17
SMARCC2-210ENST00000550519 VAX2Q9UIW0 290 aa14.01□□□□□ -0.17
SMARCC2-210ENST00000550519 ARPC5O15511 151 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 HLA-DQA1P01909 254 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 PRSS1P07477 247 aa14□□□□□ -0.17
SMARCC2-210ENST00000550519 OR5AL1P0C617 328 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms