RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
SMARCC2-208ENST00000550150 C11orf86A6NJI1 115 aa8.15□□□□□ -1.11
SMARCC2-208ENST00000550150 TAL2Q16559 108 aa8.15□□□□□ -1.11
SMARCC2-208ENST00000550150 FAM110DQ8TAY7 271 aaPredicted RBP8.15□□□□□ -1.11
SMARCC2-208ENST00000550150 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.11
SMARCC2-208ENST00000550150 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.11
SMARCC2-208ENST00000550150 M0R1W7 72 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 Q6ZS46 218 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 NEXN-AS1Q8NBZ9 246 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 C1QTNF4Q9BXJ3 329 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV21A0A0B4J279 112 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 PRO0461Q9UI25 63 aa8.14□□□□□ -1.11
SMARCC2-208ENST00000550150 FASNP49327 2511 aaKnown RBP8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 HERVK_113P61574 105 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 C1orf122Q6ZSJ8 110 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 C2CD3Q4AC94 2353 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 CD7P09564 240 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 PF4V1P10720 104 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 CRYBA4P53673 196 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 NPC2P61916 151 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 TMEM190Q8WZ59 177 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 NAV2Q8IVL1 2488 aa8.13□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV12-3A0A0B4J271 114 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 TCL1BO95988 128 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 XGP55808 180 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 HIST2H2BCQ6DN03 193 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 IGHV4-39P01824 125 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 ZNF56Q15929 161 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 CFAP126Q5VTH2 177 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 C9JAW5 83 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 LGALS3P17931 250 aaKnown RBP8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 SRSF2Q01130 221 aaKnown RBP8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 PRSS2P07478 247 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 KRTAP10-9P60411 292 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 FHL3Q13643 280 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 FAM159AQ6UWV7 190 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 TRPT1Q86TN4 253 aaKnown RBP8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 Q8N6K4 173 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 ITPR3Q14573 2671 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV12-1A0A0B4J245 112 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 A8MWV9 139 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 BPESC1Q9GZL8 116 aa8.11□□□□□ -1.11
SMARCC2-208ENST00000550150 TRAV41A0A0B4J266 112 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 EDN2P20800 178 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 ZFAND2AQ8N6M9 145 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 CCDC168Q8NDH2 2452 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 IGHV3-73A0A0B4J1V6 119 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 SCGB1A1P11684 91 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 SDHAF1A6NFY7 115 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 MINOS1Q5TGZ0 78 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 Q6ZUT4 128 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 ANKRD29Q8N6D5 301 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 MINOS1-NBL1R4GNA1 71 aa8.1□□□□□ -1.11
SMARCC2-208ENST00000550150 TRBV7-1A0A0A6YYK4 115 aa8.09□□□□□ -1.11
SMARCC2-208ENST00000550150 CDIP1Q9H305 208 aa8.09□□□□□ -1.11
SMARCC2-208ENST00000550150 TLN2Q9Y4G6 2542 aa8.09□□□□□ -1.11
SMARCC2-208ENST00000550150 ANAPC13Q9BS18 74 aa8.09□□□□□ -1.11
SMARCC2-208ENST00000550150 MUC4Q99102 2169 aa8.09□□□□□ -1.12
SMARCC2-208ENST00000550150 A0A0J9YY99 117 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CRYGDP07320 174 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 GATA3P23771 443 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CENPVL3A0A0U1RRI6 287 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 A4D1N5 150 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CFC1P0CG37 223 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 PMVKQ15126 192 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 RNF183Q96D59 192 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 ZNF580Q9UK33 172 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 ZNF688P0C7X2 276 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 PPDPFLQ8WWR9 84 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 CARD19Q96LW7 228 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 RHPN1-AS1Q9BWJ2 59 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 KLK9Q9UKQ9 250 aa8.08□□□□□ -1.12
SMARCC2-208ENST00000550150 J3QQQ9 107 aa8.07□□□□□ -1.12
SMARCC2-208ENST00000550150 NPFFO15130 113 aa8.07□□□□□ -1.12
SMARCC2-208ENST00000550150 TSHBP01222 138 aa8.07□□□□□ -1.12
SMARCC2-208ENST00000550150 TEN1Q86WV5 123 aa8.07□□□□□ -1.12
SMARCC2-208ENST00000550150 SS18L2Q9UHA2 77 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms