RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 PPP1R1AQ13522 171 aa4.03□□□□□ -1.76
LIN7A-202ENST00000549417 GOLT1AQ6ZVE7 132 aa4.03□□□□□ -1.76
LIN7A-202ENST00000549417 RPL36ALQ969Q0 106 aaKnown RBP4.03□□□□□ -1.76
LIN7A-202ENST00000549417 TRIM63Q969Q1 353 aa4.03□□□□□ -1.76
LIN7A-202ENST00000549417 PTH2Q96A98 100 aa4.03□□□□□ -1.76
LIN7A-202ENST00000549417 GGACTQ9BVM4 153 aa4.03□□□□□ -1.76
LIN7A-202ENST00000549417 TRBV7-3A0A075B6L6 115 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 CST7O76096 145 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 CRYGAP11844 174 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 S100A4P26447 101 aaKnown RBP4.02□□□□□ -1.77
LIN7A-202ENST00000549417 RPL29P47914 159 aaKnown RBP4.02□□□□□ -1.77
LIN7A-202ENST00000549417 VBP1P61758 197 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 SSBP1Q04837 148 aaKnown RBP4.02□□□□□ -1.77
LIN7A-202ENST00000549417 TMEM128Q5BJH2 165 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 MZT2AQ6P582 158 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 UQCC1Q9NVA1 299 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
LIN7A-202ENST00000549417 A0A1W2PNN7 141 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 C7orf66A4D0T2 115 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 RHODO00212 210 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 OR7C2O60412 319 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 SFT2D2O95562 160 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 GCGP01275 180 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 MBPP02686 304 aaPredicted RBP4.01□□□□□ -1.77
LIN7A-202ENST00000549417 IGLV7-43P04211 117 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 FGF7P21781 194 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 GNG5P63218 68 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 PRR27Q6MZM9 219 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 NTM-AS1Q6ZSK4 140 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
LIN7A-202ENST00000549417 SMIM4Q8WVI0 70 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 TMED6Q8WW62 240 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
LIN7A-202ENST00000549417 SLIRPQ9GZT3 109 aaKnown RBP4.01□□□□□ -1.77
LIN7A-202ENST00000549417 TRAV8-4A0A0B4J246 113 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 ANKRD20A5PA0PJZ0 165 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 H3BVH4 76 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 EIF3GO75821 320 aaKnown RBP eCLIP4□□□□□ -1.77
LIN7A-202ENST00000549417 P01737 135 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
LIN7A-202ENST00000549417 AMTP48728 403 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 BCAP31P51572 246 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 RAB2AP61019 212 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 PKIAP61925 76 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 UBE2L3P68036 154 aaKnown RBP4□□□□□ -1.77
LIN7A-202ENST00000549417 GAGE2BQ13066 116 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 CFAP161Q6P656 301 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 NEXN-AS1Q8NBZ9 246 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 CMTM2Q8TAZ6 248 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 C15orf40Q8WUR7 153 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 MIXL1Q9H2W2 232 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 GSKIPQ9P0R6 139 aa4□□□□□ -1.77
LIN7A-202ENST00000549417 USH2AO75445 5202 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 IGLV4-60A0A075B6I1 120 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 TRBV10-1A0A0K0K1A3 114 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 RGS5O15539 181 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 TAS2R30P59541 319 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 EIF5AP63241 154 aaKnown RBP3.99□□□□□ -1.77
LIN7A-202ENST00000549417 CTF1Q16619 201 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 MCFD2Q8NI22 146 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 DERL1Q9BUN8 251 aa3.99□□□□□ -1.77
LIN7A-202ENST00000549417 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
LIN7A-202ENST00000549417 L7N2F9 121 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 M0R381 172 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 GZMBP10144 247 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 PTTG1IPP53801 180 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 VAMP2P63027 116 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 MRPS10P82664 201 aaKnown RBP3.98□□□□□ -1.77
LIN7A-202ENST00000549417 IL18Q14116 193 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 TPRXLQ17RH7 258 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 IAH1Q2TAA2 248 aaPredicted RBP3.98□□□□□ -1.77
LIN7A-202ENST00000549417 SPANXN2Q5MJ10 180 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 OR11H4Q8NGC9 324 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 OR10G8Q8NGN5 311 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 CARD19Q96LW7 228 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 NDFIP1Q9BT67 221 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 NPCDR1Q9BY65 106 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 OTORQ9NRC9 128 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 OR5AC2Q9NZP5 309 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 RAB26Q9ULW5 256 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 PHLDA3Q9Y5J5 127 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
LIN7A-202ENST00000549417 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
LIN7A-202ENST00000549417 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 TRBV25-1A0A075B6N4 114 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 A0A087WZ39 114 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 GVQW2A0A096LPI5 108 aaPredicted RBP3.97□□□□□ -1.77
LIN7A-202ENST00000549417 GRIFINA4D1Z8 144 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 CTDSP2O14595 271 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 SULT1A2P50226 295 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 ZNF56Q15929 161 aa3.97□□□□□ -1.77
LIN7A-202ENST00000549417 C21orf62-AS1Q17RA5 79 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms