RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RNF185Q96GF1 192 aa14.54□□□□□ -0.08
CTDSP2-204ENST00000548823 URB1-AS1Q96HZ7 61 aa14.54□□□□□ -0.08
CTDSP2-204ENST00000548823 NXPH4O95158 308 aa14.53□□□□□ -0.08
CTDSP2-204ENST00000548823 LINC00614P0C842 121 aa14.53□□□□□ -0.08
CTDSP2-204ENST00000548823 S100A4P26447 101 aaKnown RBP14.53□□□□□ -0.08
CTDSP2-204ENST00000548823 SPANXN1Q5VSR9 72 aa14.53□□□□□ -0.08
CTDSP2-204ENST00000548823 PRELID3AQ96N28 172 aa14.53□□□□□ -0.08
CTDSP2-204ENST00000548823 D6R8Y8 96 aa14.52□□□□□ -0.08
CTDSP2-204ENST00000548823 TRAV12-3A0A0B4J271 114 aa14.51□□□□□ -0.09
CTDSP2-204ENST00000548823 RNASE3P12724 160 aaKnown RBP14.51□□□□□ -0.09
CTDSP2-204ENST00000548823 RNASEKQ6P5S7 137 aaKnown RBP14.51□□□□□ -0.09
CTDSP2-204ENST00000548823 Q6ZWC4 215 aa14.51□□□□□ -0.09
CTDSP2-204ENST00000548823 NUPR2A6NF83 97 aa14.5□□□□□ -0.09
CTDSP2-204ENST00000548823 GNRH2O43555 120 aa14.5□□□□□ -0.09
CTDSP2-204ENST00000548823 CKS2P33552 79 aa14.5□□□□□ -0.09
CTDSP2-204ENST00000548823 S100A12P80511 92 aa14.5□□□□□ -0.09
CTDSP2-204ENST00000548823 PHLDA3Q9Y5J5 127 aa14.5□□□□□ -0.09
CTDSP2-204ENST00000548823 IGHV1OR15-1A0A075B7D0 117 aa14.49□□□□□ -0.09
CTDSP2-204ENST00000548823 KNCNA6PVL3 124 aa14.49□□□□□ -0.09
CTDSP2-204ENST00000548823 M0R2Z0 102 aa14.49□□□□□ -0.09
CTDSP2-204ENST00000548823 SSTP61278 116 aa14.49□□□□□ -0.09
CTDSP2-204ENST00000548823 SPINK13Q1W4C9 94 aa14.49□□□□□ -0.09
CTDSP2-204ENST00000548823 IGKV3-20P01619 116 aa14.48□□□□□ -0.09
CTDSP2-204ENST00000548823 C20orf144Q9BQM9 153 aa14.48□□□□□ -0.09
CTDSP2-204ENST00000548823 PRSS47A8MTI9 375 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 ODF3L2Q3SX64 289 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 DEFB125Q8N687 156 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 MRAP2Q96G30 205 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 C9orf85Q96MD7 179 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 MUC4Q99102 2169 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 IGHV3-16A0A0C4DH30 117 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 CRXO43186 299 aaPredicted RBP14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 CD7P09564 240 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 EVI2AP22794 236 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 FAM19A2Q8N3H0 131 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 PRSS3P2Q8NHM4 247 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 LINC00467Q9BRT7 94 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 DPH3P1Q9H4G8 78 aa14.47□□□□□ -0.09
CTDSP2-204ENST00000548823 TRGV11A0A075B6L2 103 aa14.46□□□□□ -0.1
CTDSP2-204ENST00000548823 TRAV12-2A0A075B6T6 113 aa14.46□□□□□ -0.1
CTDSP2-204ENST00000548823 CEMP1Q6PRD7 247 aaPredicted RBP14.46□□□□□ -0.1
CTDSP2-204ENST00000548823 FA2HQ7L5A8 372 aa14.46□□□□□ -0.1
CTDSP2-204ENST00000548823 AP5S1Q9NUS5 200 aa14.46□□□□□ -0.1
CTDSP2-204ENST00000548823 LINC01546A6NGU7 62 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 NPYP01303 97 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 POM121L12Q8N7R1 296 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 AP1S3Q96PC3 154 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 MAP1LC3AQ9H492 121 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 GSN-AS1Q9NRJ2 163 aa14.45□□□□□ -0.1
CTDSP2-204ENST00000548823 IGHV1-24A0A0C4DH33 117 aa14.44□□□□□ -0.1
CTDSP2-204ENST00000548823 OR11H12B2RN74 326 aa14.44□□□□□ -0.1
CTDSP2-204ENST00000548823 M0R381 172 aa14.44□□□□□ -0.1
CTDSP2-204ENST00000548823 CDPF1Q6NVV7 123 aa14.44□□□□□ -0.1
CTDSP2-204ENST00000548823 TNFRSF6BO95407 300 aa14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 SCGB1D1O95968 90 aa14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 LGALS9CQ6DKI2 356 aa14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 NXT2Q9NPJ8 142 aaKnown RBP14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 KLK5Q9Y337 293 aaPredicted RBP14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 TIMM8BQ9Y5J9 83 aaPredicted RBP14.43□□□□□ -0.1
CTDSP2-204ENST00000548823 ABCA13Q86UQ4 5058 aa14.42□□□□□ -0.1
CTDSP2-204ENST00000548823 SMKR1H3BMG3 65 aa14.42□□□□□ -0.1
CTDSP2-204ENST00000548823 IFI27P40305 119 aaPredicted RBP14.42□□□□□ -0.1
CTDSP2-204ENST00000548823 SYT8Q8NBV8 401 aa14.42□□□□□ -0.1
CTDSP2-204ENST00000548823 NCR2O95944 276 aa14.41□□□□□ -0.1
CTDSP2-204ENST00000548823 C3orf79P0CE67 100 aa14.41□□□□□ -0.1
CTDSP2-204ENST00000548823 ZNF124Q15973 351 aa14.41□□□□□ -0.1
CTDSP2-204ENST00000548823 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
CTDSP2-204ENST00000548823 KIF25-AS1Q9Y6Z4 181 aa14.41□□□□□ -0.1
CTDSP2-204ENST00000548823 KRTDAPP60985 99 aa14.4□□□□□ -0.1
CTDSP2-204ENST00000548823 STHQ8IWL8 128 aa14.4□□□□□ -0.1
CTDSP2-204ENST00000548823 NRACQ8N912 160 aa14.4□□□□□ -0.1
CTDSP2-204ENST00000548823 PTH2Q96A98 100 aa14.4□□□□□ -0.1
CTDSP2-204ENST00000548823 LEPROTL1O95214 131 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 PPP1R17O96001 155 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 INSP01308 110 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 RBMY1A1P0DJD3 496 aaKnown RBP14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 RBMY1CP0DJD4 496 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 BTF3P20290 206 aaKnown RBP14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 RBMY1FQ15415 496 aaKnown RBP14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 PIK3CD-AS1Q5SR53 167 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 TEX43Q6ZNM6 134 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 Q8N976 141 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 HSPB8Q9UJY1 196 aa14.39□□□□□ -0.11
CTDSP2-204ENST00000548823 FXYD7P58549 80 aa14.38□□□□□ -0.11
CTDSP2-204ENST00000548823 Q8N8P6 123 aa14.38□□□□□ -0.11
CTDSP2-204ENST00000548823 MDFICQ9P1T7 246 aa14.38□□□□□ -0.11
CTDSP2-204ENST00000548823 LOC389332A0A1B0GUA5 103 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 PCP4L1A6NKN8 68 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 LINC00315P59091 139 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 PKIAP61925 76 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 NUTF2P61970 127 aaKnown RBP14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 C14orf178Q8N769 122 aaPredicted RBP14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 C20orf78Q9BR46 151 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 OVOL2Q9BRP0 275 aa14.37□□□□□ -0.11
CTDSP2-204ENST00000548823 IGLV2-18A0A075B6J9 118 aa14.36□□□□□ -0.11
CTDSP2-204ENST00000548823 CBY3A6NI87 242 aa14.36□□□□□ -0.11
CTDSP2-204ENST00000548823 GAS8-AS1O95177 125 aa14.36□□□□□ -0.11
CTDSP2-204ENST00000548823 SMIM17P0DL12 118 aa14.36□□□□□ -0.11
CTDSP2-204ENST00000548823 TMEM70Q9BUB7 260 aa14.36□□□□□ -0.11
CTDSP2-204ENST00000548823 A0A096LNJ9 63 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms