RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 TIRAPP58753 221 aa3.52□□□□□ -1.85
APP-217ENST00000548570 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
APP-217ENST00000548570 RNF212Q495C1 297 aa3.52□□□□□ -1.85
APP-217ENST00000548570 Q6ZSN1 163 aa3.52□□□□□ -1.85
APP-217ENST00000548570 Q6ZTC4 211 aa3.52□□□□□ -1.85
APP-217ENST00000548570 LINC00469Q8N7U9 141 aa3.52□□□□□ -1.85
APP-217ENST00000548570 SYT8Q8NBV8 401 aa3.52□□□□□ -1.85
APP-217ENST00000548570 OR10G8Q8NGN5 311 aa3.52□□□□□ -1.85
APP-217ENST00000548570 PTH2Q96A98 100 aa3.52□□□□□ -1.85
APP-217ENST00000548570 KCNS1Q96KK3 526 aa3.52□□□□□ -1.85
APP-217ENST00000548570 C18orf15Q96N68 181 aa3.52□□□□□ -1.85
APP-217ENST00000548570 CNFNQ9BYD5 112 aa3.52□□□□□ -1.85
APP-217ENST00000548570 VCX2Q9H322 139 aa3.52□□□□□ -1.85
APP-217ENST00000548570 IL36BQ9NZH7 164 aa3.52□□□□□ -1.85
APP-217ENST00000548570 Q9UF83 564 aa3.52□□□□□ -1.85
APP-217ENST00000548570 TIMM8BQ9Y5J9 83 aaPredicted RBP3.52□□□□□ -1.85
APP-217ENST00000548570 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
APP-217ENST00000548570 SACSQ9NZJ4 4579 aa3.52□□□□□ -1.85
APP-217ENST00000548570 STAB2Q8WWQ8 2551 aa3.52□□□□□ -1.85
APP-217ENST00000548570 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
APP-217ENST00000548570 VPS13DQ5THJ4 4388 aa3.51□□□□□ -1.85
APP-217ENST00000548570 TGP01266 2768 aa3.51□□□□□ -1.85
APP-217ENST00000548570 TRGV1A0A0A0MS02 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 GAGE12BA1L429 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 CXorf65A6NEN9 183 aa3.51□□□□□ -1.85
APP-217ENST00000548570 LYRM9A8MSI8 78 aa3.51□□□□□ -1.85
APP-217ENST00000548570 M0R2P5 195 aa3.51□□□□□ -1.85
APP-217ENST00000548570 RS1O15537 224 aa3.51□□□□□ -1.85
APP-217ENST00000548570 GAGE7O76087 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 CRYGDP07320 174 aa3.51□□□□□ -1.85
APP-217ENST00000548570 GAGE12FP0CL80 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 GAGE12GP0CL81 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 GAGE12IP0CL82 117 aa3.51□□□□□ -1.85
APP-217ENST00000548570 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
APP-217ENST00000548570 DEFB130BP0DP73 79 aa3.51□□□□□ -1.85
APP-217ENST00000548570 DEFB130AP0DP74 79 aa3.51□□□□□ -1.85
APP-217ENST00000548570 VPREB1P12018 145 aa3.51□□□□□ -1.85
APP-217ENST00000548570 ZNF415Q09FC8 603 aa3.51□□□□□ -1.85
APP-217ENST00000548570 FHL2Q14192 279 aa3.51□□□□□ -1.85
APP-217ENST00000548570 LGALS9BQ3B8N2 356 aa3.51□□□□□ -1.85
APP-217ENST00000548570 CFAP126Q5VTH2 177 aa3.51□□□□□ -1.85
APP-217ENST00000548570 LYZL1Q6UWQ5 148 aa3.51□□□□□ -1.85
APP-217ENST00000548570 FER1L6-AS1Q8NA97 138 aa3.51□□□□□ -1.85
APP-217ENST00000548570 NUP35Q8NFH5 326 aa3.51□□□□□ -1.85
APP-217ENST00000548570 TSKUQ8WUA8 353 aa3.51□□□□□ -1.85
APP-217ENST00000548570 DAZAP1Q96EP5 407 aaKnown RBP3.51□□□□□ -1.85
APP-217ENST00000548570 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
APP-217ENST00000548570 YPEL4Q96NS1 127 aa3.51□□□□□ -1.85
APP-217ENST00000548570 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
APP-217ENST00000548570 RYR3Q15413 4870 aa3.51□□□□□ -1.85
APP-217ENST00000548570 A0A1B0GXF2 115 aa3.5□□□□□ -1.85
APP-217ENST00000548570 C7orf77A4D0Y5 90 aa3.5□□□□□ -1.85
APP-217ENST00000548570 HIGD1CA8MV81 97 aa3.5□□□□□ -1.85
APP-217ENST00000548570 SNURFLB1AK76 121 aa3.5□□□□□ -1.85
APP-217ENST00000548570 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
APP-217ENST00000548570 IGHV3-53P01767 116 aa3.5□□□□□ -1.85
APP-217ENST00000548570 APOC3P02656 99 aa3.5□□□□□ -1.85
APP-217ENST00000548570 FAM3BP58499 235 aaPredicted RBP3.5□□□□□ -1.85
APP-217ENST00000548570 RPS20P60866 119 aaKnown RBP3.5□□□□□ -1.85
APP-217ENST00000548570 PNRC1Q12796 327 aaPredicted RBP3.5□□□□□ -1.85
APP-217ENST00000548570 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
APP-217ENST00000548570 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
APP-217ENST00000548570 VSIG2Q96IQ7 327 aa3.5□□□□□ -1.85
APP-217ENST00000548570 PGLYRP4Q96LB8 373 aa3.5□□□□□ -1.85
APP-217ENST00000548570 GFRA4Q9GZZ7 299 aa3.5□□□□□ -1.85
APP-217ENST00000548570 BIN3Q9NQY0 253 aa3.5□□□□□ -1.85
APP-217ENST00000548570 IGHV3-73A0A0B4J1V6 119 aa3.49□□□□□ -1.85
APP-217ENST00000548570 TRAV4A0A0B4J268 109 aa3.49□□□□□ -1.85
APP-217ENST00000548570 LOC100131303A0A0U1RQF7 123 aa3.49□□□□□ -1.85
APP-217ENST00000548570 FAM231BA6NCW3 169 aa3.49□□□□□ -1.85
APP-217ENST00000548570 PCP4L1A6NKN8 68 aa3.49□□□□□ -1.85
APP-217ENST00000548570 A8MWL6 223 aa3.49□□□□□ -1.85
APP-217ENST00000548570 M0R381 172 aa3.49□□□□□ -1.85
APP-217ENST00000548570 NTF3P20783 257 aa3.49□□□□□ -1.85
APP-217ENST00000548570 EVI2AP22794 236 aa3.49□□□□□ -1.85
APP-217ENST00000548570 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
APP-217ENST00000548570 SSTP61278 116 aa3.49□□□□□ -1.85
APP-217ENST00000548570 DAD1P61803 113 aa3.49□□□□□ -1.85
APP-217ENST00000548570 CTAG1AP78358 180 aa3.49□□□□□ -1.85
APP-217ENST00000548570 COTL1Q14019 142 aa3.49□□□□□ -1.85
APP-217ENST00000548570 NDUFA5Q16718 116 aa3.49□□□□□ -1.85
APP-217ENST00000548570 PIK3CD-AS1Q5SR53 167 aa3.49□□□□□ -1.85
APP-217ENST00000548570 TMEM88Q6PEY1 159 aa3.49□□□□□ -1.85
APP-217ENST00000548570 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
APP-217ENST00000548570 C15orf54Q8N8G6 183 aa3.49□□□□□ -1.85
APP-217ENST00000548570 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
APP-217ENST00000548570 RNF185Q96GF1 192 aa3.49□□□□□ -1.85
APP-217ENST00000548570 A0A087WWC5 75 aa3.48□□□□□ -1.85
APP-217ENST00000548570 A0A1W2PPQ1 181 aa3.48□□□□□ -1.85
APP-217ENST00000548570 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
APP-217ENST00000548570 F2Z2F3 143 aa3.48□□□□□ -1.85
APP-217ENST00000548570 SCO1O75880 301 aa3.48□□□□□ -1.85
APP-217ENST00000548570 P0DMU3 169 aa3.48□□□□□ -1.85
APP-217ENST00000548570 FAM231AP0DMU4 169 aa3.48□□□□□ -1.85
APP-217ENST00000548570 FAM231CP0DMU5 169 aa3.48□□□□□ -1.85
APP-217ENST00000548570 LINC00694P0DN24 101 aa3.48□□□□□ -1.85
APP-217ENST00000548570 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
APP-217ENST00000548570 CRYBA4P53673 196 aa3.48□□□□□ -1.85
APP-217ENST00000548570 SERTAD4-AS1Q5TG53 156 aa3.48□□□□□ -1.85
APP-217ENST00000548570 ZFAND6Q6FIF0 208 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms