RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 ARL2-SNX15V9GYD0 113 aa12.97□□□□□ -0.33
GATC-202ENST00000548171 A0A1W2PRE2 83 aa12.96□□□□□ -0.33
GATC-202ENST00000548171 UPK1BO75841 260 aa12.96□□□□□ -0.33
GATC-202ENST00000548171 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.33
GATC-202ENST00000548171 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.33
GATC-202ENST00000548171 DAZAP1Q96EP5 407 aaKnown RBP12.96□□□□□ -0.33
GATC-202ENST00000548171 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
GATC-202ENST00000548171 FAT3Q8TDW7 4589 aa12.95□□□□□ -0.34
GATC-202ENST00000548171 CRPP02741 224 aa12.95□□□□□ -0.34
GATC-202ENST00000548171 ARMS2P0C7Q2 107 aa12.95□□□□□ -0.34
GATC-202ENST00000548171 SFRP2Q96HF1 295 aa12.95□□□□□ -0.34
GATC-202ENST00000548171 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 HNRNPA3P51991 378 aaKnown RBP12.94□□□□□ -0.34
GATC-202ENST00000548171 UBE2D3P61077 147 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 UBE2D2P62837 147 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 SERF2P84101 59 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 DGAT2L7PQ6IED9 249 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 HSD17B11Q8NBQ5 300 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 PHLDA3Q9Y5J5 127 aa12.94□□□□□ -0.34
GATC-202ENST00000548171 A0A087WWL8 130 aa12.93□□□□□ -0.34
GATC-202ENST00000548171 TRAV34A0A0B4J273 112 aa12.93□□□□□ -0.34
GATC-202ENST00000548171 KRBOX1C9JBD0 128 aa12.93□□□□□ -0.34
GATC-202ENST00000548171 TMEM262E9PQX1 116 aa12.93□□□□□ -0.34
GATC-202ENST00000548171 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
GATC-202ENST00000548171 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
GATC-202ENST00000548171 USP17L23D6RBM5 183 aa12.92□□□□□ -0.34
GATC-202ENST00000548171 Q86TA4 180 aa12.92□□□□□ -0.34
GATC-202ENST00000548171 TNFSF18Q9UNG2 199 aa12.92□□□□□ -0.34
GATC-202ENST00000548171 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 M0R036 132 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 IFNA7P01567 189 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 TPT1P13693 172 aaKnown RBP12.91□□□□□ -0.34
GATC-202ENST00000548171 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 PKIAP61925 76 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 OR10G8Q8NGN5 311 aa12.91□□□□□ -0.34
GATC-202ENST00000548171 M0R381 172 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 MIAQ16674 131 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 COX8CQ7Z4L0 72 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 ZFP82Q8N141 532 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 HIST1H2BAQ96A08 127 aa12.9□□□□□ -0.34
GATC-202ENST00000548171 NKX6-2Q9C056 277 aaPredicted RBP12.9□□□□□ -0.34
GATC-202ENST00000548171 GRIFINA4D1Z8 144 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 PEX7O00628 323 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 ANGP03950 147 aaKnown RBP12.89□□□□□ -0.35
GATC-202ENST00000548171 PRSS1P07477 247 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 CRIP1P50238 77 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 MPV17L2Q567V2 206 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 Q6ZRU5 148 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 ZC2HC1AQ96GY0 325 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
GATC-202ENST00000548171 SH2D1AO60880 128 aa12.88□□□□□ -0.35
GATC-202ENST00000548171 MT1HL1P0DM35 61 aa12.88□□□□□ -0.35
GATC-202ENST00000548171 IFITM3Q01628 133 aa12.88□□□□□ -0.35
GATC-202ENST00000548171 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.88□□□□□ -0.35
GATC-202ENST00000548171 A0A0D9SG52 128 aa12.87□□□□□ -0.35
GATC-202ENST00000548171 RAB4BP61018 213 aa12.87□□□□□ -0.35
GATC-202ENST00000548171 RPL19P84098 196 aaKnown RBP12.87□□□□□ -0.35
GATC-202ENST00000548171 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
GATC-202ENST00000548171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
GATC-202ENST00000548171 AQP10Q96PS8 301 aa12.86□□□□□ -0.35
GATC-202ENST00000548171 PTTG1O95997 202 aa12.85□□□□□ -0.35
GATC-202ENST00000548171 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
GATC-202ENST00000548171 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
GATC-202ENST00000548171 DEFA1P59665 94 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 DEFA3P59666 94 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 UBE2G2P60604 165 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 SDIM1Q6ZPB5 146 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 CLRN3Q8NCR9 226 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 PRR34Q9NV39 138 aa12.84□□□□□ -0.35
GATC-202ENST00000548171 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 FAM74A7A6NL05 159 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 PRR27Q6MZM9 219 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 NEXN-AS1Q8NBZ9 246 aa12.83□□□□□ -0.36
GATC-202ENST00000548171 UBE2G1P62253 170 aa12.82□□□□□ -0.36
GATC-202ENST00000548171 ZNF56Q15929 161 aa12.82□□□□□ -0.36
GATC-202ENST00000548171 PKHD1L1Q86WI1 4243 aa12.81□□□□□ -0.36
GATC-202ENST00000548171 PANO1I0J062 215 aa12.81□□□□□ -0.36
GATC-202ENST00000548171 CIRBPQ14011 172 aaKnown RBP12.81□□□□□ -0.36
GATC-202ENST00000548171 ZNF726P1Q15940 193 aa12.81□□□□□ -0.36
GATC-202ENST00000548171 TCEAL7Q9BRU2 100 aa12.81□□□□□ -0.36
GATC-202ENST00000548171 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
GATC-202ENST00000548171 LTAP01374 205 aa12.8□□□□□ -0.36
GATC-202ENST00000548171 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
GATC-202ENST00000548171 CNBPP62633 177 aaKnown RBP12.79□□□□□ -0.36
GATC-202ENST00000548171 RBX1P62877 108 aa12.79□□□□□ -0.36
GATC-202ENST00000548171 LINC00269Q8N2A0 174 aa12.79□□□□□ -0.36
GATC-202ENST00000548171 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
GATC-202ENST00000548171 A6NHS1 94 aa12.78□□□□□ -0.36
GATC-202ENST00000548171 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
GATC-202ENST00000548171 ZNF471Q9BX82 626 aaPredicted RBP12.78□□□□□ -0.36
GATC-202ENST00000548171 TRBV25-1A0A075B6N4 114 aa12.77□□□□□ -0.37
GATC-202ENST00000548171 BORCS7-ASMTA0A0B4J1R7 106 aa12.77□□□□□ -0.37
GATC-202ENST00000548171 CLPSL2Q6UWE3 100 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms