RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 SLURP1P55000 103 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 PAX9P55771 341 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 YPEL3P61236 119 aaPredicted RBP4.29□□□□□ -1.72
PTPRB-206ENST00000548122 MIC13Q5XKP0 118 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 NEGR1Q7Z3B1 354 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 LYPD6Q86Y78 171 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 RITA1Q96K30 269 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 RNASE7Q9H1E1 156 aaKnown RBP4.29□□□□□ -1.72
PTPRB-206ENST00000548122 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 H3BUA1 57 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 IGHG4P01861 327 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 CRYBB3P26998 211 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 ZNF138P52744 262 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 FAM222AQ5U5X8 452 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 OCC1Q8TAD7 63 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 MLST8Q9BVC4 326 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 TRAV1-1A0A0B4J248 108 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 LOC389332A0A1B0GUA5 103 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 C15orf61A6NNL5 157 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
PTPRB-206ENST00000548122 C4orf3Q8WVX3 66 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 CYYR1Q96J86 154 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 LRBAP50851 2863 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 MP68P56378 58 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 ORMDL2Q53FV1 153 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 UFSP1Q6NVU6 142 aa4.29□□□□□ -1.72
PTPRB-206ENST00000548122 TRAV2A0A0B4J234 112 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 TRAV3A0A0B4J244 114 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 IL4P05112 153 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 EBI3Q14213 229 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 PYGO2Q9BRQ0 406 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 SRRM4A7MD48 611 aaKnown RBP4.28□□□□□ -1.72
PTPRB-206ENST00000548122 FABP5P3A8MUU1 101 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 NDUFA3O95167 84 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPRB-206ENST00000548122 APOC4P55056 127 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 HERVK_113P63121 156 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 PSG9Q00887 426 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 PIFOQ8TCI5 191 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 LINC00477Q96M19 166 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 A0A087WW49 117 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 FOXI3A8MTJ6 420 aaPredicted RBP4.28□□□□□ -1.72
PTPRB-206ENST00000548122 A8MWL6 223 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 GGTLC3B5MD39 225 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 F2Z2F3 143 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 ERCC8Q13216 396 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 KRTAP21-3Q3LHN1 58 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 DAND5Q8N907 189 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 RMI2Q96E14 147 aa4.28□□□□□ -1.72
PTPRB-206ENST00000548122 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
PTPRB-206ENST00000548122 C8orf88P0DMB2 117 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 INSL3P51460 131 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 PRCDQ00LT1 54 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 IGF1P05019 195 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 UBE2BP63146 152 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 C4orf26Q17RF5 130 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 C19orf54Q5BKX5 351 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 PVRIGQ6DKI7 326 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 ZNF491Q8N8L2 437 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 IL17DQ8TAD2 202 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
PTPRB-206ENST00000548122 NSD1Q96L73 2696 aaPredicted RBP4.27□□□□□ -1.73
PTPRB-206ENST00000548122 PFN2P35080 140 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 NDPQ00604 133 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 TMEM243Q9BU79 118 aa4.27□□□□□ -1.73
PTPRB-206ENST00000548122 PLXNB1O43157 2135 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 INAFM2P0DMQ5 153 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 Q6Q795 121 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 ZC2HC1AQ96GY0 325 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 TP53TG3Q9ULZ0 132 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 TANC2Q9HCD6 1990 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 A0A087WZ39 114 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 SNRPD3P62318 126 aaKnown RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 AMTNQ6UX39 209 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 KIR2DL4Q99706 377 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 GATA1P15976 413 aaPredicted RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 GCHFRP30047 84 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 C5orf17Q8NAS9 161 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 ST20Q9HBF5 79 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 DAZ1Q9NQZ3 744 aaKnown RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 IGHV3OR16-12A0A075B7B8 117 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 APOHP02749 345 aaPredicted RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 CMC4P56277 68 aaPredicted RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 REG3AQ06141 175 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 TTC9CQ8N5M4 171 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 Q8N6K4 173 aa4.26□□□□□ -1.73
PTPRB-206ENST00000548122 DLX4Q92988 240 aaPredicted RBP4.26□□□□□ -1.73
PTPRB-206ENST00000548122 PGPA6NDG6 321 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms