RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 JPT2Q9H910 190 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 Q9UF83 564 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 RYR1P21817 5038 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 HSPG2P98160 4391 aa4.5□□□□□ -1.69
SCAF11-211ENST00000547950 MAP1LC3B2A6NCE7 125 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 A8MWV9 139 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 KRBOX1C9JBD0 128 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 H3BVH4 76 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 SH2D1AO60880 128 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-211ENST00000547950 ARMS2P0C7Q2 107 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 FHITP49789 147 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 UBE2G1P62253 170 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 RGS21Q2M5E4 152 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 Q86TA4 180 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 C14orf178Q8N769 122 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-211ENST00000547950 STOML3Q8TAV4 291 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 ZC2HC1AQ96GY0 325 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 NKX6-2Q9C056 277 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-211ENST00000547950 MAP1LC3BQ9GZQ8 125 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 CYTL1Q9NRR1 136 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 ZFP30Q9Y2G7 519 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
SCAF11-211ENST00000547950 MUC4Q99102 2169 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 A0A087WWL8 130 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 A0A1B0GV50 99 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 LRCOL1A6NCL2 159 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 G3V3Q6 166 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 M0R381 172 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 HAMPP81172 84 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 FAM162BQ5T6X4 162 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 FAM74A4Q5TZK3 123 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 OR11H4Q8NGC9 324 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 IL36BQ9NZH7 164 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 PHLDA3Q9Y5J5 127 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
SCAF11-211ENST00000547950 LECT2O14960 151 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 PAGE4O60829 102 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 INAFM2P0DMQ5 153 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 TPT1P13693 172 aaKnown RBP4.47□□□□□ -1.69
SCAF11-211ENST00000547950 SSTP61278 116 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 DAZ4Q86SG3 579 aaKnown RBP4.47□□□□□ -1.69
SCAF11-211ENST00000547950 Q8N814 137 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 SFT2D1Q8WV19 159 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 FRZBQ92765 325 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 TM2D2Q9BX73 214 aa4.47□□□□□ -1.69
SCAF11-211ENST00000547950 DAZ3Q9NR90 486 aaKnown RBP4.47□□□□□ -1.69
SCAF11-211ENST00000547950 A0A087WWC5 75 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 RHODO00212 210 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 LTAP01374 205 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 AKR1C3P42330 323 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 ZNF674Q2M3X9 581 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 DNLZQ5SXM8 178 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 Q5VSD8 79 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 COX8CQ7Z4L0 72 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 KCNRGQ8N5I3 272 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 FAM213BQ8TBF2 198 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-211ENST00000547950 SFRP2Q96HF1 295 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 URGCP-MRPS24S4R325 110 aa4.46□□□□□ -1.7
SCAF11-211ENST00000547950 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
SCAF11-211ENST00000547950 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 TRBV6-1A0A0K0K1D8 114 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 TMEM262E9PQX1 116 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 SEC11BP0C7V7 166 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 WFDC2Q14508 124 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 LAGE3Q14657 143 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 TOR2AQ5JU69 321 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 BAGE2Q86Y30 109 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 ZFP82Q8N141 532 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 MBD3L1Q8WWY6 194 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 BAALCQ8WXS3 180 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 TCEAL7Q9BRU2 100 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 ZNF471Q9BX82 626 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-211ENST00000547950 KLK12Q9UKR0 248 aa4.45□□□□□ -1.7
SCAF11-211ENST00000547950 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.44□□□□□ -1.7
SCAF11-211ENST00000547950 A0A087WX48 190 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 A0A0D9SG52 128 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 HMSDA8MTL9 139 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 UMAD1C9J7I0 102 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 PFDN1O60925 122 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 S100A9P06702 114 aaKnown RBP4.44□□□□□ -1.7
SCAF11-211ENST00000547950 RPL36AP83881 106 aaKnown RBP4.44□□□□□ -1.7
SCAF11-211ENST00000547950 RPL19P84098 196 aaKnown RBP4.44□□□□□ -1.7
SCAF11-211ENST00000547950 PRR27Q6MZM9 219 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 KCNIP4Q6PIL6 250 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 TMUB2Q71RG4 321 aa4.44□□□□□ -1.7
SCAF11-211ENST00000547950 NIT1Q86X76 327 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms