RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TEX29Q8N6K0 151 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 OR8J3Q8NGG0 315 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 OR51A4Q8NGJ6 313 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 OR5H6Q8NGV6 325 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 ZNF418Q8TF45 676 aaPredicted RBP2.23□□□□□ -2.05
SCAF11-210ENST00000547654 MCEEQ96PE7 176 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 MYH11P35749 1972 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 DENND4CQ5VZ89 1909 aa2.23□□□□□ -2.05
SCAF11-210ENST00000547654 NYNRINQ9P2P1 1898 aaKnown RBP2.22□□□□□ -2.05
SCAF11-210ENST00000547654 TRPM6Q9BX84 2022 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 TRAV3A0A0B4J244 114 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 LOC107984640A0A0U1RRK4 108 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 M0R2Z0 102 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 NDUFA2O43678 99 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 PGLYRP1O75594 196 aaPredicted RBP2.22□□□□□ -2.05
SCAF11-210ENST00000547654 KLRD1Q13241 179 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 MORN2Q502X0 79 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 ZNF826PQ6ZT77 177 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 OR4B1Q8NGF8 309 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 OR2T35Q8NGX2 323 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 RNASE11Q8TAA1 199 aaKnown RBP2.22□□□□□ -2.05
SCAF11-210ENST00000547654 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 CHCHD1Q96BP2 118 aaKnown RBP2.22□□□□□ -2.05
SCAF11-210ENST00000547654 VPS25Q9BRG1 176 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 TPT1P8Q9HAU6 139 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 CMYA5Q8N3K9 4069 aa2.22□□□□□ -2.05
SCAF11-210ENST00000547654 ZGRF1Q86YA3 2104 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 SONP18583 2426 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 MYO18AQ92614 2054 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 ABCA13Q86UQ4 5058 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 TRBV27A0A0K0K1C4 114 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 J3QR89 54 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 P0DMU3 169 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 FAM231AP0DMU4 169 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 FAM231CP0DMU5 169 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 EVI2AP22794 236 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 RPL22P35268 128 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 LSM3P62310 102 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 MRPS36P82909 103 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 HIST1H1AQ02539 215 aaPredicted RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 CHD3Q12873 2000 aaKnown RBP2.21□□□□□ -2.06
SCAF11-210ENST00000547654 TMEM155Q4W5P6 130 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 TMEM244Q5VVB8 128 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 PRELID3AQ96N28 172 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 SLC50A1Q9BRV3 221 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 CXCL16Q9H2A7 254 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 CST9LQ9H4G1 147 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 C14orf132Q9NPU4 83 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 CBLN4Q9NTU7 201 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 ABCA4P78363 2273 aa2.21□□□□□ -2.06
SCAF11-210ENST00000547654 DNAH1Q9P2D7 4330 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 A0A1B0GW64 132 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 ZNF705FA8MVS1 300 aaPredicted RBP2.2□□□□□ -2.06
SCAF11-210ENST00000547654 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 C5orf58C9J3I9 102 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 C17orf112F2Z3M2 114 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 LYRM1O43325 122 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 UBL3O95164 117 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 MT-ND4LP03901 98 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 RAB5CP51148 216 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 SS18Q15532 418 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 RNASE10Q5GAN6 216 aaKnown RBP2.2□□□□□ -2.06
SCAF11-210ENST00000547654 FAM216BQ8N7L0 139 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 LINC00301Q8NCQ3 95 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 TSTD1Q8NFU3 115 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 MAGOHBQ96A72 148 aaKnown RBP2.2□□□□□ -2.06
SCAF11-210ENST00000547654 SMIM3Q9BZL3 60 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 U3KQ87 197 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 HERC1Q15751 4861 aa2.2□□□□□ -2.06
SCAF11-210ENST00000547654 CACNA1CQ13936 2221 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 IGLV3-9A0A075B6K5 115 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 TRAV1-1A0A0B4J248 108 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 TRGV4A0A0C4DH28 118 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 A0A0G2JQZ4 141 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 LY6LH3BQJ8 138 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 SULT1C4O75897 302 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 CD52P31358 61 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 CDK5R1Q15078 307 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 TAF9Q16594 264 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 HCP5Q6MZN7 132 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 PATE2Q6UY27 113 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 OR4S1Q8NGB4 309 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 RETNLBQ9BQ08 111 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 TIMM21Q9BVV7 248 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 LHFPL6Q9Y693 200 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 TNRC6AQ8NDV7 1962 aaKnown RBP2.19□□□□□ -2.06
SCAF11-210ENST00000547654 HIVEP2P31629 2446 aa2.19□□□□□ -2.06
SCAF11-210ENST00000547654 HRNRQ86YZ3 2850 aaPredicted RBP2.19□□□□□ -2.06
SCAF11-210ENST00000547654 CCDC171Q6TFL3 1326 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 PLXNA2O75051 1894 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 DOCK4Q8N1I0 1966 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 POLEQ07864 2286 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 IGKV3D-11A0A0A0MRZ8 115 aa2.18□□□□□ -2.06
SCAF11-210ENST00000547654 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.18□□□□□ -2.06
SCAF11-210ENST00000547654 OR2T8A6NH00 312 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms