RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 CSMD3Q7Z407 3707 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 LCE6AA0A183 80 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 F8W036 122 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 GATA1P15976 413 aaPredicted RBP12.54□□□□□ -0.4
BRF1-209ENST00000547052 CTRLP40313 264 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 ZNF56Q15929 161 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 POM121L12Q8N7R1 296 aa12.54□□□□□ -0.4
BRF1-209ENST00000547052 A0A087WWL8 130 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 MUC21A0A0G2JKD1 596 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 MUC21A0A140T8X8 626 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 F5H697 171 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 GYPEP15421 78 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 TWIST1Q15672 202 aa12.53□□□□□ -0.4
BRF1-209ENST00000547052 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
BRF1-209ENST00000547052 LINC00862A6NCI5 91 aa12.52□□□□□ -0.41
BRF1-209ENST00000547052 K7EQD1 137 aa12.52□□□□□ -0.41
BRF1-209ENST00000547052 MT-ND4LP03901 98 aa12.52□□□□□ -0.41
BRF1-209ENST00000547052 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
BRF1-209ENST00000547052 RNF212Q495C1 297 aa12.52□□□□□ -0.41
BRF1-209ENST00000547052 H7C1H1 209 aa12.51□□□□□ -0.41
BRF1-209ENST00000547052 RAB4BP61018 213 aa12.51□□□□□ -0.41
BRF1-209ENST00000547052 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
BRF1-209ENST00000547052 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
BRF1-209ENST00000547052 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
BRF1-209ENST00000547052 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 HIGD1CA8MV81 97 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 MGPP08493 103 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 NTF3P20783 257 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 VSIG2Q96IQ7 327 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 JPT2Q9H910 190 aa12.5□□□□□ -0.41
BRF1-209ENST00000547052 A0A1B0GUT8 65 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 RIGQ13278 110 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 ZNF575Q86XF7 245 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
BRF1-209ENST00000547052 SEC11CQ9BY50 192 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 CNFNQ9BYD5 112 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 DPH3P1Q9H4G8 78 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 V9GYV3 84 aa12.49□□□□□ -0.41
BRF1-209ENST00000547052 A0A096LPF7 62 aa12.48□□□□□ -0.41
BRF1-209ENST00000547052 TRBV10-1A0A0K0K1A3 114 aa12.48□□□□□ -0.41
BRF1-209ENST00000547052 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
BRF1-209ENST00000547052 S100A8P05109 93 aa12.47□□□□□ -0.41
BRF1-209ENST00000547052 CRYGDP07320 174 aa12.47□□□□□ -0.41
BRF1-209ENST00000547052 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
BRF1-209ENST00000547052 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
BRF1-209ENST00000547052 GTSF1Q8WW33 167 aa12.47□□□□□ -0.41
BRF1-209ENST00000547052 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
BRF1-209ENST00000547052 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.41
BRF1-209ENST00000547052 A0A1B0GW15 77 aa12.45□□□□□ -0.42
BRF1-209ENST00000547052 STARD9Q9P2P6 4700 aa12.45□□□□□ -0.42
BRF1-209ENST00000547052 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
BRF1-209ENST00000547052 MSRB1Q9NZV6 116 aa12.44□□□□□ -0.42
BRF1-209ENST00000547052 SMIM27A0A1W2PRY6 76 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 GAGE12JA6NER3 117 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 EVI2AP22794 236 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 GAGE1Q13065 139 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 GAGE4Q13068 117 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 GAGE5Q13069 117 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 GAGE13Q4V321 117 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
BRF1-209ENST00000547052 KCNIP4Q6PIL6 250 aa12.42□□□□□ -0.42
BRF1-209ENST00000547052 CTDSP1Q9GZU7 261 aa12.42□□□□□ -0.42
BRF1-209ENST00000547052 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
BRF1-209ENST00000547052 TNFRSF18Q9Y5U5 241 aa12.42□□□□□ -0.42
BRF1-209ENST00000547052 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
BRF1-209ENST00000547052 TRAV8-6A0A0B4J262 113 aa12.41□□□□□ -0.42
BRF1-209ENST00000547052 LOC100131303A0A0U1RQF7 123 aa12.41□□□□□ -0.42
BRF1-209ENST00000547052 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
BRF1-209ENST00000547052 A0A087WWC5 75 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 S100PP25815 95 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 TIRAPP58753 221 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 ESRGQ1W209 222 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 FRZBQ92765 325 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 GTSF1LQ9H1H1 148 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
BRF1-209ENST00000547052 ADCYAP1P18509 176 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 RHEBQ15382 184 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 TMEM97Q5BJF2 176 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 OR10J3Q5JRS4 329 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 LYPD5Q6UWN5 251 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 Q6ZSN1 163 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 TMEM191AQ9H0A3 160 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 KIF25-AS1Q9Y6Z4 181 aa12.39□□□□□ -0.43
BRF1-209ENST00000547052 HBBP68871 147 aa12.38□□□□□ -0.43
BRF1-209ENST00000547052 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
BRF1-209ENST00000547052 CARHSP1Q9Y2V2 147 aaKnown RBP12.38□□□□□ -0.43
BRF1-209ENST00000547052 ALMS1Q8TCU4 4167 aa12.38□□□□□ -0.43
BRF1-209ENST00000547052 TRAV9-2A0A087WT02 112 aa12.37□□□□□ -0.43
BRF1-209ENST00000547052 SIVA1O15304 175 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms