RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 CRIP1P50238 77 aa13.17□□□□□ -0.3
SCN8A-204ENST00000546961 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
SCN8A-204ENST00000546961 UBE2WQ96B02 151 aa13.17□□□□□ -0.3
SCN8A-204ENST00000546961 PEX7O00628 323 aa13.16□□□□□ -0.3
SCN8A-204ENST00000546961 Q5BKY6 102 aa13.16□□□□□ -0.3
SCN8A-204ENST00000546961 A0A087WX48 190 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 ZNF726P1Q15940 193 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 DNLZQ5SXM8 178 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
SCN8A-204ENST00000546961 Q86TA4 180 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 ZC2HC1AQ96GY0 325 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 CHAC1Q9BUX1 264 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 MED28Q9H204 178 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 PHLDA3Q9Y5J5 127 aa13.15□□□□□ -0.3
SCN8A-204ENST00000546961 SH2D1AO60880 128 aa13.14□□□□□ -0.31
SCN8A-204ENST00000546961 KCNIP4Q6PIL6 250 aa13.14□□□□□ -0.31
SCN8A-204ENST00000546961 SFRP2Q96HF1 295 aa13.14□□□□□ -0.31
SCN8A-204ENST00000546961 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 BORCS7-ASMTA0A0B4J1R7 106 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 CTXND1A0A1B0GTU2 59 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 M0R381 172 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 TPT1P13693 172 aaKnown RBP13.13□□□□□ -0.31
SCN8A-204ENST00000546961 ELOBQ15370 118 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 FAM162BQ5T6X4 162 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 INO80EQ8NBZ0 244 aaPredicted RBP13.13□□□□□ -0.31
SCN8A-204ENST00000546961 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 NKX6-2Q9C056 277 aaPredicted RBP13.13□□□□□ -0.31
SCN8A-204ENST00000546961 ZFP30Q9Y2G7 519 aa13.13□□□□□ -0.31
SCN8A-204ENST00000546961 FAM74A7A6NL05 159 aa13.12□□□□□ -0.31
SCN8A-204ENST00000546961 TMEM262E9PQX1 116 aa13.12□□□□□ -0.31
SCN8A-204ENST00000546961 CIRBP-AS1Q8TBR5 109 aa13.12□□□□□ -0.31
SCN8A-204ENST00000546961 RPL36AP83881 106 aaKnown RBP13.1□□□□□ -0.31
SCN8A-204ENST00000546961 RPL36ALQ969Q0 106 aaKnown RBP13.1□□□□□ -0.31
SCN8A-204ENST00000546961 CHCHD7Q9BUK0 85 aa13.1□□□□□ -0.31
SCN8A-204ENST00000546961 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 UBE2D3P61077 147 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 UBE2G1P62253 170 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 UBE2D2P62837 147 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 Q0VG73 95 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 AKR1C8PQ5T2L2 129 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
SCN8A-204ENST00000546961 TRBV7-3A0A075B6L6 115 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 FXYD6-FXYD2A0A087WZ82 144 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
SCN8A-204ENST00000546961 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 ZFP82Q8N141 532 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
SCN8A-204ENST00000546961 LRP1Q07954 4544 aaKnown RBP13.07□□□□□ -0.32
SCN8A-204ENST00000546961 GIPP09681 153 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-204ENST00000546961 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
SCN8A-204ENST00000546961 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
SCN8A-204ENST00000546961 C1orf43Q9BWL3 253 aa13.07□□□□□ -0.32
SCN8A-204ENST00000546961 C14orf177Q52M58 125 aa13.06□□□□□ -0.32
SCN8A-204ENST00000546961 CST9LP1Q5W188 147 aa13.06□□□□□ -0.32
SCN8A-204ENST00000546961 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
SCN8A-204ENST00000546961 C15orf54Q8N8G6 183 aa13.06□□□□□ -0.32
SCN8A-204ENST00000546961 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 MAP1LC3B2A6NCE7 125 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 OXTP01178 125 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 LTAP01374 205 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 IGLV2-8P01709 118 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 CRPP02741 224 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 MAP1LC3BQ9GZQ8 125 aa13.04□□□□□ -0.32
SCN8A-204ENST00000546961 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
SCN8A-204ENST00000546961 RAB4BP61018 213 aa13.03□□□□□ -0.32
SCN8A-204ENST00000546961 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
SCN8A-204ENST00000546961 PTTG1O95997 202 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 AKR1C3P42330 323 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 FHITP49789 147 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 ZNF56Q15929 161 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 MPV17L2Q567V2 206 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 NEXN-AS1Q8NBZ9 246 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 STOML3Q8TAV4 291 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.33
SCN8A-204ENST00000546961 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
SCN8A-204ENST00000546961 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
SCN8A-204ENST00000546961 MUC21A0A0G2JKD1 596 aa13□□□□□ -0.33
SCN8A-204ENST00000546961 MUC21A0A140T8X8 626 aa13□□□□□ -0.33
SCN8A-204ENST00000546961 F5H697 171 aa13□□□□□ -0.33
SCN8A-204ENST00000546961 SSTP61278 116 aa13□□□□□ -0.33
SCN8A-204ENST00000546961 RPL19P84098 196 aaKnown RBP13□□□□□ -0.33
SCN8A-204ENST00000546961 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
SCN8A-204ENST00000546961 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
SCN8A-204ENST00000546961 ZNF471Q9BX82 626 aaPredicted RBP13□□□□□ -0.33
SCN8A-204ENST00000546961 PAGE4O60829 102 aa12.99□□□□□ -0.33
SCN8A-204ENST00000546961 HLA-DQA1P01909 254 aa12.99□□□□□ -0.33
SCN8A-204ENST00000546961 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
SCN8A-204ENST00000546961 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
SCN8A-204ENST00000546961 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
SCN8A-204ENST00000546961 FAT3Q8TDW7 4589 aa12.98□□□□□ -0.33
SCN8A-204ENST00000546961 PRSS1P07477 247 aa12.98□□□□□ -0.33
SCN8A-204ENST00000546961 MIAQ16674 131 aa12.97□□□□□ -0.33
SCN8A-204ENST00000546961 SPANXN1Q5VSR9 72 aa12.97□□□□□ -0.33
SCN8A-204ENST00000546961 HMCN2Q8NDA2 5059 aa12.97□□□□□ -0.33
SCN8A-204ENST00000546961 ARPC5O15511 151 aa12.96□□□□□ -0.33
SCN8A-204ENST00000546961 PKIAP61925 76 aa12.96□□□□□ -0.33
SCN8A-204ENST00000546961 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
SCN8A-204ENST00000546961 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms