RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
SCAF11-208ENST00000546534 KCNIP4Q6PIL6 250 aa8.12□□□□□ -1.11
SCAF11-208ENST00000546534 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
SCAF11-208ENST00000546534 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 OR10G7Q8NGN6 311 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 NUDT15Q9NV35 164 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
SCAF11-208ENST00000546534 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 TMEM262E9PQX1 116 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 GAS8-AS1O95177 125 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 CRPP02741 224 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 S100A4P26447 101 aaKnown RBP8.1□□□□□ -1.11
SCAF11-208ENST00000546534 RPL19P84098 196 aaKnown RBP8.1□□□□□ -1.11
SCAF11-208ENST00000546534 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
SCAF11-208ENST00000546534 SMUG1Q53HV7 270 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 HSD17B11Q8NBQ5 300 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 PSG8Q9UQ74 426 aa8.1□□□□□ -1.11
SCAF11-208ENST00000546534 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 H0YIZ8 118 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 LYRM1O43325 122 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 TCRAP04437 139 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 PQLC2Q6ZP29 291 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 LINC01600Q96MT4 127 aa8.09□□□□□ -1.11
SCAF11-208ENST00000546534 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 RHODO00212 210 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
SCAF11-208ENST00000546534 ZFP69Q49AA0 526 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 MPV17L2Q567V2 206 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
SCAF11-208ENST00000546534 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
SCAF11-208ENST00000546534 SIX6O95475 246 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 UBE2D3P61077 147 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 UBE2D2P62837 147 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 FLI1Q01543 452 aaPredicted RBP8.07□□□□□ -1.12
SCAF11-208ENST00000546534 LRRC37A5PQ49AS3 106 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 C5orf17Q8NAS9 161 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 IL36BQ9NZH7 164 aa8.07□□□□□ -1.12
SCAF11-208ENST00000546534 A0A087WWL8 130 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 A0A087WYN8 130 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 A0A1W2PPV4 95 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 H3BVH4 76 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 K7EQM0 130 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
SCAF11-208ENST00000546534 MIAQ16674 131 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
SCAF11-208ENST00000546534 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
SCAF11-208ENST00000546534 TRBV10-1A0A0K0K1A3 114 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 PHOX2AO14813 284 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 CHTF8P0CG12 524 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 RAB2AP61019 212 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 SCGB1C1Q8TD33 95 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 SFRP2Q96HF1 295 aa8.05□□□□□ -1.12
SCAF11-208ENST00000546534 TRBV7-3A0A075B6L6 115 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 FABP5P3A8MUU1 101 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 ARMS2P0C7Q2 107 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 ARL14EPLP0DKL9 152 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 SAPCD1Q5SSQ6 148 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 OR11H4Q8NGC9 324 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 SMIM3Q9BZL3 60 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 HSPB11Q9Y547 144 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
SCAF11-208ENST00000546534 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 B4DEV8 164 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
SCAF11-208ENST00000546534 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 CHCHD5Q9BSY4 110 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 RBM38Q9H0Z9 239 aaKnown RBP8.03□□□□□ -1.12
SCAF11-208ENST00000546534 PRR34Q9NV39 138 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
SCAF11-208ENST00000546534 IGHV3-64A0A075B6Q5 118 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 GRIFINA4D1Z8 144 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 PTTG1O95997 202 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 OR10G8Q8NGN5 311 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 WFDC1Q9HC57 220 aa8.02□□□□□ -1.13
SCAF11-208ENST00000546534 TRAV34A0A0B4J273 112 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 KRBOX1C9JBD0 128 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 M0R381 172 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 SLPIP03973 132 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 WDR73Q6P4I2 378 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 LINC00269Q8N2A0 174 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 SUN5Q8TC36 379 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 ARL2-SNX15V9GYD0 113 aa8.01□□□□□ -1.13
SCAF11-208ENST00000546534 hCG_2014768A0A024R1R8 64 aa8□□□□□ -1.13
SCAF11-208ENST00000546534 M0R036 132 aa8□□□□□ -1.13
SCAF11-208ENST00000546534 STAG3L2P0CL84 134 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms