RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 C15orf62A8K5M9 175 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 APRG1Q8IVJ8 170 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 TPSG1Q9NRR2 321 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 C15orf65H3BRN8 121 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 COX8AP10176 69 aa6.74□□□□□ -1.33
CLIP1-218ENST00000545889 F8W1H4 67 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 MT-ATP8P03928 68 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 Q6ZS49 121 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 Q8N976 141 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 C15orf53Q8NAA6 179 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 OR11H6Q8NGC7 330 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 ESM1Q9NQ30 184 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 IGHV3-38A0A0C4DH36 116 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 IGKV1-39P01597 117 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 IGKV1D-39P04432 117 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 ZNF493Q6ZR52 646 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 ANKRD17O75179 2603 aaKnown RBP6.73□□□□□ -1.33
CLIP1-218ENST00000545889 D6R8Y8 96 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 NPC2P61916 151 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 NEGR1Q7Z3B1 354 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 LOC400499M0QZD8 3231 aa6.73□□□□□ -1.33
CLIP1-218ENST00000545889 A0A1W2PPR1 153 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 CLPSL2Q6UWE3 100 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
CLIP1-218ENST00000545889 PFN2P35080 140 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 ICOSQ9Y6W8 199 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 VWC2LB2RUY7 222 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 K7EN84 100 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 NXPH4O95158 308 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 LY6G6DO95868 133 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 WT1-ASQ06250 92 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 PRR25Q96S07 402 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 V9GYV3 84 aa6.72□□□□□ -1.33
CLIP1-218ENST00000545889 COL27A1Q8IZC6 1860 aaPredicted RBP6.71□□□□□ -1.33
CLIP1-218ENST00000545889 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.33
CLIP1-218ENST00000545889 FNDC10F2Z333 226 aa6.71□□□□□ -1.33
CLIP1-218ENST00000545889 MAP1AP78559 2803 aaPredicted RBP6.71□□□□□ -1.34
CLIP1-218ENST00000545889 M0QXV9 152 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 M0R2P5 195 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 U3KQE9 123 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 UTF1Q5T230 341 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 Q6ZPA2 131 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 C10orf126Q8N4M7 172 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 SIGLEC8Q9NYZ4 499 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 IGSF10Q6WRI0 2623 aa6.71□□□□□ -1.34
CLIP1-218ENST00000545889 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 EDA2RQ9HAV5 297 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 ERG28Q9UKR5 140 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 MAST4O15021 2626 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 DEFB4AO15263 64 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 Q6ZQT7 251 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 CFAP46Q8IYW2 2715 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 HELZ2Q9BYK8 2649 aaKnown RBP6.7□□□□□ -1.34
CLIP1-218ENST00000545889 F6UB75 175 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 IGKCP01834 107 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 TIMM21Q9BVV7 248 aa6.7□□□□□ -1.34
CLIP1-218ENST00000545889 TRBV19A0A075B6N1 114 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV4OR15-8A0A075B7B6 117 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 A0A087WW49 117 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 C2orf70A6NJV1 201 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 LEPROTO15243 131 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 CHCHD1Q96BP2 118 aaKnown RBP6.69□□□□□ -1.34
CLIP1-218ENST00000545889 LINC00479Q96M42 142 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 GYPEP15421 78 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 PCP2Q8IVA1 136 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 SLC25A2Q9BXI2 301 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV7-81A0A0B4J1V7 117 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 IFITM1P13164 125 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 PMVKQ15126 192 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 TAL2Q16559 108 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 Q86TA4 180 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 UFSP1Q6NVU6 142 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 CFHR4Q92496 578 aa6.69□□□□□ -1.34
CLIP1-218ENST00000545889 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV3-30P01768 117 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV3-30-5P0DP03 117 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 I3L3M4 83 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 CRLF1O75462 422 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 HLA-DRB4P13762 266 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
CLIP1-218ENST00000545889 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-218ENST00000545889 HLA-DRB4X5D2U9 266 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms