RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 A6NN06 94 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 ZNHIT1O43257 154 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 COX6B1P14854 86 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 RNASE4P34096 147 aaKnown RBP3.79□□□□□ -1.8
UBE4A-203ENST00000545354 ZNF137PP52743 207 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 LIMD2Q9BT23 127 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 TTTY13Q9BZ97 58 aa3.79□□□□□ -1.8
UBE4A-203ENST00000545354 ACACBO00763 2458 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV1-69DA0A0B4J2H0 117 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 D6R8Y8 96 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 GLI4P10075 376 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 FOLR3P41439 243 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 Q8N6K4 173 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 Q8N7P7 452 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 ITLN1Q8WWA0 313 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 ITLN2Q8WWU7 325 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-203ENST00000545354 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 PROK2Q9HC23 129 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 POLEQ07864 2286 aa3.78□□□□□ -1.8
UBE4A-203ENST00000545354 PTPRSQ13332 1948 aa3.78□□□□□ -1.81
UBE4A-203ENST00000545354 FAM186AA6NE01 2351 aa3.78□□□□□ -1.81
UBE4A-203ENST00000545354 IGLV3-10A0A075B6K4 115 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 IGKV1D-13A0A0B4J2D9 117 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 IGKV1-13P0DP09 117 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 LINC00205P59089 165 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 SYCNQ0VAF6 134 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 TDRD6O60522 2096 aaKnown RBP3.77□□□□□ -1.81
UBE4A-203ENST00000545354 RAI1Q7Z5J4 1906 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-203ENST00000545354 ZNF292O60281 2723 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 SETXQ7Z333 2677 aaKnown RBP3.77□□□□□ -1.81
UBE4A-203ENST00000545354 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-203ENST00000545354 C12orf77C9JDV5 145 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 WISP2O76076 250 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 PLA2G1BP04054 148 aaKnown RBP3.77□□□□□ -1.81
UBE4A-203ENST00000545354 NRACQ8N912 160 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 RMI2Q96E14 147 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 IMMP1LQ96LU5 166 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 MAP6D1Q9H9H5 199 aa3.77□□□□□ -1.81
UBE4A-203ENST00000545354 TRGV8A0A0C4DH27 118 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 M0R3E3 92 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 SOCS3O14543 225 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 NDUFA3O95167 84 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 SPINT3P49223 89 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 C11orf71Q6IPW1 123 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 SOSTDC1Q6X4U4 206 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 ARHGAP21Q5T5U3 1957 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 PCDH15Q96QU1 1955 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 TECTAO75443 2155 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 IGHV3OR16-10A0A075B7F0 116 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 TRBV6-6A0A0A6YYG2 114 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 H3BSH0 61 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 IGLV3-25P01717 112 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 PRNTQ86SH4 94 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 CCL4L1Q8NHW4 92 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 SMCHD1A6NHR9 2005 aa3.76□□□□□ -1.81
UBE4A-203ENST00000545354 FASNP49327 2511 aaKnown RBP3.75□□□□□ -1.81
UBE4A-203ENST00000545354 IGLV3-16A0A075B6K0 115 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 A0A0G2JRQ6 117 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 KRTAP9-6A0A140TA67 174 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 BAALC-AS2P0C853 105 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 IGHV4-31P0DP07 118 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
UBE4A-203ENST00000545354 HOXA4Q00056 320 aaPredicted RBP3.75□□□□□ -1.81
UBE4A-203ENST00000545354 UBL5Q9BZL1 73 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 CCL28Q9NRJ3 127 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 ASPMQ8IZT6 3477 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 USP24Q9UPU5 2620 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 SPTBN2O15020 2390 aa3.75□□□□□ -1.81
UBE4A-203ENST00000545354 IGKV3D-7A0A0C4DH55 119 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 E7EUB6 86 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 GNRH2O43555 120 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 FOXL2NBQ6ZUU3 175 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 BPESC1Q9GZL8 116 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 KIAA1549LQ6ZVL6 1849 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 EP300Q09472 2414 aaPredicted RBP3.74□□□□□ -1.81
UBE4A-203ENST00000545354 COL4A6Q14031 1691 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 MAP1BP46821 2468 aaKnown RBP3.74□□□□□ -1.81
UBE4A-203ENST00000545354 RALGAPA1Q6GYQ0 2036 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 hDV103S1A0JD37 113 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 PSPNO60542 156 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 MIR17HGQ75NE6 70 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 C8orf49Q96NF6 230 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 THADAQ6YHU6 1953 aa3.74□□□□□ -1.81
UBE4A-203ENST00000545354 TRAV22A0A0B4J277 110 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 HCG22E2RYF7 251 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 C3orf84H3BNL1 204 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 RPS21P63220 83 aaKnown RBP3.73□□□□□ -1.81
UBE4A-203ENST00000545354 PDE6HQ13956 83 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 PATE2Q6UY27 113 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
UBE4A-203ENST00000545354 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms