RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 DNAH10OSP0CZ25 163 aa10.72□□□□□ -0.69
CCDC78-216ENST00000544996 LINC00315P59091 139 aa10.72□□□□□ -0.69
CCDC78-216ENST00000544996 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
CCDC78-216ENST00000544996 SSBP4Q9BWG4 385 aaPredicted RBP10.72□□□□□ -0.69
CCDC78-216ENST00000544996 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
CCDC78-216ENST00000544996 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 SNAI2O43623 268 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 CRYGDP07320 174 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
CCDC78-216ENST00000544996 GAGE1Q13065 139 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 GAGE4Q13068 117 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 GAGE5Q13069 117 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 SPANXN1Q5VSR9 72 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
CCDC78-216ENST00000544996 FAT2Q9NYQ8 4349 aa10.71□□□□□ -0.7
CCDC78-216ENST00000544996 IGHV3-38A0A0C4DH36 116 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 XKRY2A2RUG3 117 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 RBFOX3A6NFN3 312 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 P01737 135 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 LELP1Q5T871 98 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
CCDC78-216ENST00000544996 OR2D3Q8NGH3 330 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
CCDC78-216ENST00000544996 TRBV20OR9-2A0A075B6H5 130 aa10.69□□□□□ -0.7
CCDC78-216ENST00000544996 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
CCDC78-216ENST00000544996 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 C19orf71A6NCJ1 209 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 TMEM250H0YL14 139 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 RAB4BP61018 213 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 SSTP61278 116 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 FER1L6-AS1Q8NA97 138 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 TPPP3Q9BW30 176 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
CCDC78-216ENST00000544996 A0A087WWC5 75 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 ZNF56Q15929 161 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 NDUFA5Q16718 116 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 LINC01556Q5JQF7 62 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 Q9UF83 564 aa10.67□□□□□ -0.7
CCDC78-216ENST00000544996 GZMBP10144 247 aa10.66□□□□□ -0.7
CCDC78-216ENST00000544996 S100A1P23297 94 aa10.66□□□□□ -0.7
CCDC78-216ENST00000544996 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
CCDC78-216ENST00000544996 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
CCDC78-216ENST00000544996 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
CCDC78-216ENST00000544996 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
CCDC78-216ENST00000544996 F2Z2F3 143 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 F5H697 171 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 CACNG7P62955 275 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.7
CCDC78-216ENST00000544996 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
CCDC78-216ENST00000544996 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 EREGO14944 169 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 CEBPGP53567 150 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 TOR2AQ5JU69 321 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 NUDT10Q8NFP7 164 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 NUDT11Q96G61 164 aa10.64□□□□□ -0.71
CCDC78-216ENST00000544996 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
CCDC78-216ENST00000544996 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
CCDC78-216ENST00000544996 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
CCDC78-216ENST00000544996 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
CCDC78-216ENST00000544996 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
CCDC78-216ENST00000544996 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
CCDC78-216ENST00000544996 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
CCDC78-216ENST00000544996 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
CCDC78-216ENST00000544996 K7EN84 100 aa10.62□□□□□ -0.71
CCDC78-216ENST00000544996 NDUFS6O75380 124 aaKnown RBP10.62□□□□□ -0.71
CCDC78-216ENST00000544996 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
CCDC78-216ENST00000544996 SPATA12Q7Z6I5 190 aa10.62□□□□□ -0.71
CCDC78-216ENST00000544996 OR10G8Q8NGN5 311 aa10.62□□□□□ -0.71
CCDC78-216ENST00000544996 TRGC1P0CF51 173 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 UBE2D3P61077 147 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 UBE2D2P62837 147 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 LYZL1Q6UWQ5 148 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
CCDC78-216ENST00000544996 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 URGCP-MRPS24S4R325 110 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 PKD1P98161 4303 aa10.61□□□□□ -0.71
CCDC78-216ENST00000544996 SMIM7Q9BQ49 75 aa10.6□□□□□ -0.71
CCDC78-216ENST00000544996 H7C1H1 209 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 PSCAO43653 123 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 MGPP08493 103 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 NTF3P20783 257 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 CTRLP40313 264 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 LAGE3Q14657 143 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 WDR73Q6P4I2 378 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 KCNIP4Q6PIL6 250 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 TEX261Q6UWH6 196 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 NEXN-AS1Q8NBZ9 246 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 Q9HAA7 133 aa10.59□□□□□ -0.71
CCDC78-216ENST00000544996 ZNF727A8MUV8 499 aa10.58□□□□□ -0.72
CCDC78-216ENST00000544996 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms