RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-221ENST00000544983 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 HOXA5P20719 270 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 NTF3P20783 257 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 TMEM88Q6PEY1 159 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 CTDSP1Q9GZU7 261 aa8.25□□□□□ -1.09
SNHG1-221ENST00000544983 TRAV26-1A0A087WT03 109 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 A0A1B0GW15 77 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 CRYGDP07320 174 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 CRYBA4P53673 196 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 RHOHQ15669 191 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 RNF212Q495C1 297 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 PRADC1Q9BSG0 188 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 NACAE9PAV3 2078 aa8.24□□□□□ -1.09
SNHG1-221ENST00000544983 RAB4BP61018 213 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 RIGQ13278 110 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 RHEBQ15382 184 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 TWIST1Q15672 202 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 IMMP2LQ96T52 175 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 APLNQ9ULZ1 77 aa8.23□□□□□ -1.09
SNHG1-221ENST00000544983 A0A087WWC5 75 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 A0A087WWL8 130 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 S100A8P05109 93 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
SNHG1-221ENST00000544983 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 SVBPQ8N300 66 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 NUP35Q8NFH5 326 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 FRZBQ92765 325 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 DPH3P1Q9H4G8 78 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 JPT2Q9H910 190 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
SNHG1-221ENST00000544983 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 H7C1H1 209 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 P0DMU3 169 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 FAM231AP0DMU4 169 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 FAM231CP0DMU5 169 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 SSTP61278 116 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 C14orf178Q8N769 122 aaPredicted RBP8.21□□□□□ -1.1
SNHG1-221ENST00000544983 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 SAMD10Q9BYL1 202 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.1
SNHG1-221ENST00000544983 IGHV3-73A0A0B4J1V6 119 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 A0A0J9YY99 117 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 K7EQD1 137 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 SNAPINO95295 136 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 NUDT3O95989 172 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 FAM3BP58499 235 aaPredicted RBP8.2□□□□□ -1.1
SNHG1-221ENST00000544983 ZNF56Q15929 161 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 ATP5L2Q7Z4Y8 100 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 CLRN3Q8NCR9 226 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
SNHG1-221ENST00000544983 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 F5H697 171 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 APOC3P02656 99 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 GYPEP15421 78 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 EVI2AP22794 236 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 LGALS9CQ6DKI2 356 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
SNHG1-221ENST00000544983 A0A096LPF7 62 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 S100PP25815 95 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 SRIP30626 198 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 CCL18P55774 89 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 LINC00315P59091 139 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 HBBP68871 147 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 BTF3L4Q96K17 158 aa8.18□□□□□ -1.1
SNHG1-221ENST00000544983 TIRAPP58753 221 aa8.17□□□□□ -1.1
SNHG1-221ENST00000544983 RPL36AP83881 106 aaKnown RBP8.17□□□□□ -1.1
SNHG1-221ENST00000544983 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
SNHG1-221ENST00000544983 Q6ZSN1 163 aa8.17□□□□□ -1.1
SNHG1-221ENST00000544983 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
SNHG1-221ENST00000544983 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-221ENST00000544983 RPL36ALQ969Q0 106 aaKnown RBP8.17□□□□□ -1.1
SNHG1-221ENST00000544983 DNAJC30Q96LL9 226 aa8.17□□□□□ -1.1
SNHG1-221ENST00000544983 TRBV7-3A0A075B6L6 115 aa8.16□□□□□ -1.1
SNHG1-221ENST00000544983 MGPP08493 103 aa8.16□□□□□ -1.1
SNHG1-221ENST00000544983 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
SNHG1-221ENST00000544983 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 A0A1B0GXF2 115 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 M0QY20 66 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 PPP1R17O96001 155 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 LINC00476Q8WZB0 136 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
SNHG1-221ENST00000544983 DYNC2H1Q8NCM8 4307 aaKnown RBP8.14□□□□□ -1.11
SNHG1-221ENST00000544983 LCE6AA0A183 80 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms