RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 GATA1P15976 413 aaPredicted RBP8.45□□□□□ -1.06
USP28-212ENST00000544750 LAGE3Q14657 143 aa8.45□□□□□ -1.06
USP28-212ENST00000544750 EIF5AL1Q6IS14 154 aaKnown RBP8.45□□□□□ -1.06
USP28-212ENST00000544750 AKR1C3P42330 323 aa8.44□□□□□ -1.06
USP28-212ENST00000544750 UBE2G1P62253 170 aa8.44□□□□□ -1.06
USP28-212ENST00000544750 ZFP30Q9Y2G7 519 aa8.44□□□□□ -1.06
USP28-212ENST00000544750 FABP5P3A8MUU1 101 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 SH2D1AO60880 128 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 NKX2-5P52952 324 aaPredicted RBP8.43□□□□□ -1.06
USP28-212ENST00000544750 ZNF674Q2M3X9 581 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 NHLRC2Q8NBF2 726 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 OR4C5Q8NGB2 326 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 C11orf52Q96A22 123 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 TM2D2Q9BX73 214 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 MANBALQ9NQG1 85 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 GNG13Q9P2W3 67 aa8.43□□□□□ -1.06
USP28-212ENST00000544750 LRP2P98164 4655 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 TRAV8-6A0A0B4J262 113 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 LINC01620Q4KN68 170 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 LELP1Q5T871 98 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 CHAC1Q9BUX1 264 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 MLST8Q9BVC4 326 aa8.42□□□□□ -1.06
USP28-212ENST00000544750 TNXBP22105 4242 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.41□□□□□ -1.06
USP28-212ENST00000544750 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 KRBOX1C9JBD0 128 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 FAM162BQ5T6X4 162 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 Q8N3U1 123 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 SLC25A29Q8N8R3 303 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 PTH2Q96A98 100 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 DERL1Q9BUN8 251 aa8.41□□□□□ -1.06
USP28-212ENST00000544750 B4DEV8 164 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 M0R036 132 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 LECT2O14960 151 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 S100A9P06702 114 aaKnown RBP8.4□□□□□ -1.06
USP28-212ENST00000544750 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 ZNF876PQ49A33 203 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 ALKAL2Q6UX46 152 aa8.4□□□□□ -1.06
USP28-212ENST00000544750 RNF213Q63HN8 5207 aa8.4□□□□□ -1.07
USP28-212ENST00000544750 H3BVH4 76 aa8.39□□□□□ -1.07
USP28-212ENST00000544750 RS1O15537 224 aa8.39□□□□□ -1.07
USP28-212ENST00000544750 BCL2P10415 239 aa8.39□□□□□ -1.07
USP28-212ENST00000544750 RPL35P42766 123 aaKnown RBP8.39□□□□□ -1.07
USP28-212ENST00000544750 CFAP126Q5VTH2 177 aa8.39□□□□□ -1.07
USP28-212ENST00000544750 IL36BQ9NZH7 164 aa8.39□□□□□ -1.07
USP28-212ENST00000544750 TRBV6-4A0A1B0GX49 114 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 GRIFINA4D1Z8 144 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 TEX46H3BTG2 121 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 ASIPP42127 132 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 HNRNPA3P51991 378 aaKnown RBP8.38□□□□□ -1.07
USP28-212ENST00000544750 MEF2BQ02080 365 aaPredicted RBP8.38□□□□□ -1.07
USP28-212ENST00000544750 BAGE2Q86Y30 109 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
USP28-212ENST00000544750 TRBV20OR9-2A0A075B6H5 130 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 TRAV8-3A0A0A6YYJ7 113 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 S100A4P26447 101 aaKnown RBP8.37□□□□□ -1.07
USP28-212ENST00000544750 RPL19P84098 196 aaKnown RBP8.37□□□□□ -1.07
USP28-212ENST00000544750 RHOHQ15669 191 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 JPT2Q9H910 190 aa8.37□□□□□ -1.07
USP28-212ENST00000544750 CENPWQ5EE01 88 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 UFSP1Q6NVU6 142 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 DAZ4Q86SG3 579 aaKnown RBP8.36□□□□□ -1.07
USP28-212ENST00000544750 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
USP28-212ENST00000544750 PRADC1Q9BSG0 188 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 PARLQ9H300 379 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 DAZ3Q9NR90 486 aaKnown RBP8.36□□□□□ -1.07
USP28-212ENST00000544750 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
USP28-212ENST00000544750 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 RAB19A4D1S5 217 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 PDE6DO43924 150 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 CIDEAO60543 219 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 IFNA1P01562 189 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 CXCL1P09341 107 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 SAMD10Q9BYL1 202 aa8.35□□□□□ -1.07
USP28-212ENST00000544750 RBFOX3A6NFN3 312 aa8.34□□□□□ -1.07
USP28-212ENST00000544750 BLOC1S1P78537 153 aa8.34□□□□□ -1.07
USP28-212ENST00000544750 PRR27Q6MZM9 219 aa8.34□□□□□ -1.07
USP28-212ENST00000544750 Q8N976 141 aa8.34□□□□□ -1.07
USP28-212ENST00000544750 COX11Q9Y6N1 276 aa8.34□□□□□ -1.07
USP28-212ENST00000544750 C19orf71A6NCJ1 209 aa8.33□□□□□ -1.08
USP28-212ENST00000544750 A8MWV9 139 aa8.33□□□□□ -1.08
USP28-212ENST00000544750 TAGLN2P37802 199 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms