RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	RTBDN	Q9BSG5	229 aa	Predicted RBP	4	□□□□□ -1.77
CPSF7-222	ENST00000544585	NAA60	Q9H7X0	242 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	PRO0255	Q9UI72	69 aa		4	□□□□□ -1.77
CPSF7-222	ENST00000544585	IGKV1OR2-108	A0A075B7D4	117 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	RAB19	A4D1S5	217 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	RAB3D	O95716	219 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	S100A11	P31949	105 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	SMCO1	Q147U7	214 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	TDRG1	Q3Y452	100 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	SCGB2B2	Q4G0G5	96 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585		Q6ZTI0	123 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	NEGR1	Q7Z3B1	354 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	MRPL55	Q7Z7F7	128 aa	Known RBP	3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	TMEM101	Q96IK0	257 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	HHLA3	Q9XRX5	114 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	RNF213	Q63HN8	5207 aa		3.99	□□□□□ -1.77
CPSF7-222	ENST00000544585	TRAV5	A0A0B4J249	113 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585		A0A0D9SG52	128 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	LRCOL1	A6NCL2	159 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	CRYM-AS1	A6NIL9	109 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	DISC1	C4P0D8	188 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	KRBOX1	C9JBD0	128 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	PEX7	O00628	323 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	GATC	O43716	136 aa	Known RBP	3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	HYPM	O75409	117 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	MED6	O75586	246 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	CXCL2	P19875	107 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	RAB4A	P20338	218 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	HAMP	P81172	84 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	REG3A	Q06141	175 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	VAMP3	Q15836	100 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	C9orf129	Q5T035	196 aa	Known RBP	3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	LINC00173	Q6ZV60	143 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	C12orf45	Q8N5I9	185 aa	Predicted RBP	3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	SCGB3A2	Q96PL1	93 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	CIB3	Q96Q77	187 aa	Predicted RBP	3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	LINC00467	Q9BRT7	94 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	SLC50A1	Q9BRV3	221 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	SHANK2-AS3	Q9BTD1	123 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	MRPL32	Q9BYC8	188 aa	Known RBP	3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	FUT9	Q9Y231	359 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	HIGD1A	Q9Y241	93 aa		3.98	□□□□□ -1.77
CPSF7-222	ENST00000544585	FXYD6-FXYD2	A0A087WZ82	144 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	TRAV12-3	A0A0B4J271	114 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585		H3BRN7	92 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	ARPC5	O15511	151 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	SPINK4	O60575	86 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	SLC25A5	P05141	298 aa	Known RBP	3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	CRYGD	P07320	174 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	NMB	P08949	121 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	CRYBA4	P53673	196 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	LCN15	Q6UWW0	184 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	TEX43	Q6ZNM6	134 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	EIF4E3	Q8N5X7	224 aa	Known RBP	3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585		Q8N814	137 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	PHYHIPL	Q96FC7	376 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	ODF3	Q96PU9	254 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	PRRT1	Q99946	306 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	TREM1	Q9NP99	234 aa		3.97	□□□□□ -1.77
CPSF7-222	ENST00000544585	VPS13B	Q7Z7G8	4022 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	TRGV1	A0A0A0MS02	117 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	KANTR	A0A1W2PQU2	76 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585		A6NDN8	102 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	IBA57-AS1	B1ANH7	110 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	PHOX2A	O14813	284 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	PITX3	O75364	302 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	ORM1	P02763	201 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	OR5G3	P0C626	314 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	OR4E1	P0C645	316 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	PRB4	P10163	310 aa	Predicted RBP	3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	SLC25A6	P12236	298 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	SRI	P30626	198 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	CAV2	P51636	162 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	H2BFS	P57053	126 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	ZNF345	Q14585	488 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	CYP2G1P	Q6ZSU1	146 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	SH2D6	Q7Z4S9	175 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	LYZL2	Q7Z4W2	148 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	STX12	Q86Y82	276 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	CBLN2	Q8IUK8	224 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	KCNRG	Q8N5I3	272 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	C20orf203	Q8NBC4	194 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	BAALC	Q8WXS3	180 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	TXNDC17	Q9BRA2	123 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	ARL6	Q9H0F7	186 aa		3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.96	□□□□□ -1.78
CPSF7-222	ENST00000544585	DUXB	A0A1W2PPF3	345 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	SYNGR2	O43760	224 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	SIX6	O95475	246 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	RAB5A	P20339	215 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	TCL1A	P56279	114 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	AKR1C1	Q04828	323 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	IBA57	Q5T440	356 aa	Known RBP	3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585		Q6ZSA8	131 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	BPIFA4P	Q86YQ2	179 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	WFDC10B	Q8IUB3	73 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	C11orf72	Q8NBR9	251 aa		3.95	□□□□□ -1.78
CPSF7-222	ENST00000544585	LINC00477	Q96M19	166 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms