RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
PCDH9-204ENST00000544246 AJUBAQ96IF1 538 aa8.04□□□□□ -1.12
PCDH9-204ENST00000544246 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
PCDH9-204ENST00000544246 CHD5Q8TDI0 1954 aa8.04□□□□□ -1.12
PCDH9-204ENST00000544246 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
PCDH9-204ENST00000544246 IGFL3Q6UXB1 125 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 PLXNA3P51805 1871 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 CENPVL3A0A0U1RRI6 287 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 IGLV1-44P01699 117 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 IGKV2-24A0A0C4DH68 120 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 WFDC10BQ8IUB3 73 aa8.03□□□□□ -1.12
PCDH9-204ENST00000544246 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 LRCOL1A6NCL2 159 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 UQCRQO14949 82 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 MSRB1Q9NZV6 116 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 BDP1A6H8Y1 2624 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-204ENST00000544246 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
PCDH9-204ENST00000544246 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 UFSP1Q6NVU6 142 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 CEP250Q9BV73 2442 aa8.02□□□□□ -1.13
PCDH9-204ENST00000544246 MIAQ16674 131 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 LYPD6Q86Y78 171 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 I3L2K1 104 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 ANK1P16157 1881 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 DEFB135Q30KP9 77 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 DEFB4AO15263 64 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 SPTBP11277 2137 aa8.01□□□□□ -1.13
PCDH9-204ENST00000544246 FHL1Q13642 323 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 CUL9Q8IWT3 2517 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 A6NED7 52 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 ZNF503-AS2A6NEH8 195 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 IGKV1-17P01599 117 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 GREB1Q4ZG55 1949 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 MYCNOSP40205 109 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 NDUFV3P56181 108 aaKnown RBP8□□□□□ -1.13
PCDH9-204ENST00000544246 ENHOQ6UWT2 76 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 SCXQ7RTU7 201 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 NDUFA11Q86Y39 141 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 C4orf3Q8WVX3 66 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
PCDH9-204ENST00000544246 A0A096LNI7 61 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 IGHV7-81A0A0B4J1V7 117 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 IGHV4-38-2P0DP08 117 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 RNASE8Q8TDE3 154 aaKnown RBP7.99□□□□□ -1.13
PCDH9-204ENST00000544246 TMEM263Q8WUH6 116 aaKnown RBP7.99□□□□□ -1.13
PCDH9-204ENST00000544246 C1orf147Q96MC9 270 aaPredicted RBP7.99□□□□□ -1.13
PCDH9-204ENST00000544246 ESPL1Q14674 2120 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 C2orf70A6NJV1 201 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 TCL1BO95988 128 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 PCNX2A6NKB5 2137 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 A0A087WZ39 114 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 LRRK1Q38SD2 2015 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 IGHV4-30-2A0A087WSY4 118 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 A0A0J9YWU9 116 aa7.99□□□□□ -1.13
PCDH9-204ENST00000544246 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 PTH2Q96A98 100 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 CTSGP08311 255 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 PRO0255Q9UI72 69 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 CTSZQ9UBR2 303 aa7.98□□□□□ -1.13
PCDH9-204ENST00000544246 K7EIM0 57 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 K7EMT4 169 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
PCDH9-204ENST00000544246 INTS1Q8N201 2190 aaKnown RBP7.97□□□□□ -1.13
PCDH9-204ENST00000544246 NYNRINQ9P2P1 1898 aaKnown RBP7.97□□□□□ -1.13
PCDH9-204ENST00000544246 ARHGEF17Q96PE2 2063 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-204ENST00000544246 TRBV6-1A0A0K0K1D8 114 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 NUPR1O60356 82 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 PIK3CD-AS1Q5SR53 167 aa7.97□□□□□ -1.13
PCDH9-204ENST00000544246 C10orf105Q8TEF2 133 aa7.96□□□□□ -1.13
PCDH9-204ENST00000544246 UBE2D1P51668 147 aa7.96□□□□□ -1.13
PCDH9-204ENST00000544246 ZFAND2AQ8N6M9 145 aa7.96□□□□□ -1.13
PCDH9-204ENST00000544246 Q8N9W7 124 aa7.96□□□□□ -1.13
PCDH9-204ENST00000544246 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.13
PCDH9-204ENST00000544246 PRAC2D3DTV9 90 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 NDUFC1O43677 76 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 ODF1Q14990 250 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 Q8NFD4 153 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 ICE1Q9Y2F5 2266 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 CTRLP40313 264 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 REG3AQ06141 175 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 C5orf56Q8N8D9 126 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 C11orf45Q8TAV5 145 aa7.96□□□□□ -1.14
PCDH9-204ENST00000544246 DIDO1Q9BTC0 2240 aaKnown RBP7.95□□□□□ -1.14
PCDH9-204ENST00000544246 SIRPDQ9H106 197 aa7.95□□□□□ -1.14
PCDH9-204ENST00000544246 PIEZO1Q92508 2521 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms