RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 C16orf54Q6UWD8 224 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 DOCK8Q8NF50 2099 aa11.93□□□□□ -0.5
CHD4-210ENST00000544040 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
CHD4-210ENST00000544040 FGF23Q9GZV9 251 aaPredicted RBP11.92□□□□□ -0.5
CHD4-210ENST00000544040 CTSGP08311 255 aa11.92□□□□□ -0.5
CHD4-210ENST00000544040 EP300Q09472 2414 aaPredicted RBP11.92□□□□□ -0.5
CHD4-210ENST00000544040 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
CHD4-210ENST00000544040 CEMP1Q6PRD7 247 aaPredicted RBP11.92□□□□□ -0.5
CHD4-210ENST00000544040 BRWD3Q6RI45 1802 aa11.92□□□□□ -0.5
CHD4-210ENST00000544040 E9PLD3 99 aa11.92□□□□□ -0.5
CHD4-210ENST00000544040 IGLV11-55A0A075B6I3 123 aa11.91□□□□□ -0.5
CHD4-210ENST00000544040 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
CHD4-210ENST00000544040 C4orf48Q5BLP8 95 aa11.91□□□□□ -0.5
CHD4-210ENST00000544040 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
CHD4-210ENST00000544040 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
CHD4-210ENST00000544040 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.5
CHD4-210ENST00000544040 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
CHD4-210ENST00000544040 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
CHD4-210ENST00000544040 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
CHD4-210ENST00000544040 IGHV4-61A0A0C4DH41 118 aa11.9□□□□□ -0.5
CHD4-210ENST00000544040 HIGD1BQ9P298 99 aa11.9□□□□□ -0.51
CHD4-210ENST00000544040 MLST8Q9BVC4 326 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 TCL1BO95988 128 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 IGHV4-30-2A0A087WSY4 118 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 TMEM256-PLSCR3K7ERE1 68 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 DYSFO75923 2080 aa11.89□□□□□ -0.51
CHD4-210ENST00000544040 A0A0U1RQV1 116 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 LYPD6Q86Y78 171 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 TCF20Q9UGU0 1960 aaKnown RBP11.88□□□□□ -0.51
CHD4-210ENST00000544040 J3QKU1 62 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 RNF152Q8N8N0 203 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 DEFB135Q30KP9 77 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 ODF1Q14990 250 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 SCXQ7RTU7 201 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
CHD4-210ENST00000544040 H3BQ85 93 aa11.87□□□□□ -0.51
CHD4-210ENST00000544040 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
CHD4-210ENST00000544040 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
CHD4-210ENST00000544040 EML6Q6ZMW3 1958 aa11.87□□□□□ -0.51
CHD4-210ENST00000544040 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
CHD4-210ENST00000544040 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
CHD4-210ENST00000544040 NRGNQ92686 78 aa11.86□□□□□ -0.51
CHD4-210ENST00000544040 TEX22C9J3V5 150 aa11.86□□□□□ -0.51
CHD4-210ENST00000544040 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
CHD4-210ENST00000544040 ABCA4P78363 2273 aa11.86□□□□□ -0.51
CHD4-210ENST00000544040 HELZP42694 1942 aaKnown RBP11.85□□□□□ -0.51
CHD4-210ENST00000544040 C2orf70A6NJV1 201 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 C5orf56Q8N8D9 126 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 A0A096LNI7 61 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 P0DMU3 169 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 COX7BP24311 80 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 USF3Q68DE3 2245 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 H3BT86 120 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 Q8N9W7 124 aa11.85□□□□□ -0.51
CHD4-210ENST00000544040 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
CHD4-210ENST00000544040 Q6ZUT4 128 aa11.84□□□□□ -0.51
CHD4-210ENST00000544040 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
CHD4-210ENST00000544040 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
CHD4-210ENST00000544040 COL6A6A6NMZ7 2263 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 E7EUB6 86 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 SPATA12Q7Z6I5 190 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 TICRRQ7Z2Z1 1910 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 BPY2O14599 106 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 RNF138Q8WVD3 245 aa11.83□□□□□ -0.52
CHD4-210ENST00000544040 PLXNA3P51805 1871 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 SLPIP03973 132 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 CASC2Q6XLA1 102 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 VWA8A3KMH1 1905 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 CHD3Q12873 2000 aaKnown RBP11.82□□□□□ -0.52
CHD4-210ENST00000544040 PLA2G5P39877 138 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 DEFB113Q30KQ7 82 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 CXCL5P42830 114 aa11.82□□□□□ -0.52
CHD4-210ENST00000544040 CTRLP40313 264 aa11.81□□□□□ -0.52
CHD4-210ENST00000544040 SBF1O95248 1867 aa11.81□□□□□ -0.52
CHD4-210ENST00000544040 MIAQ16674 131 aa11.81□□□□□ -0.52
CHD4-210ENST00000544040 TP53TG3Q9ULZ0 132 aa11.81□□□□□ -0.52
CHD4-210ENST00000544040 LINC00643Q86TS7 51 aa11.81□□□□□ -0.52
CHD4-210ENST00000544040 NDUFV3P56181 108 aaKnown RBP11.8□□□□□ -0.52
CHD4-210ENST00000544040 B9D2Q9BPU9 175 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 Q8NFD4 153 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
CHD4-210ENST00000544040 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 SPTBN2O15020 2390 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 A0A0J9YWU9 116 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 HIGD2AQ9BW72 106 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 GVINP1Q7Z2Y8 2422 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 IGLC6P0CF74 106 aa11.8□□□□□ -0.52
CHD4-210ENST00000544040 ROS1P08922 2347 aa11.79□□□□□ -0.52
CHD4-210ENST00000544040 UNQ9165/PRO28630Q6UXU0 137 aa11.79□□□□□ -0.52
CHD4-210ENST00000544040 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 984.8 ms