RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 BLCAPP62952 87 aa10.11□□□□□ -0.79
TNC-212ENST00000542877 Q8N1Y9 231 aa10.11□□□□□ -0.79
TNC-212ENST00000542877 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
TNC-212ENST00000542877 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
TNC-212ENST00000542877 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
TNC-212ENST00000542877 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
TNC-212ENST00000542877 COX7A2LO14548 114 aa10.11□□□□□ -0.79
TNC-212ENST00000542877 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
TNC-212ENST00000542877 GYPEP15421 78 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 SPATA12Q7Z6I5 190 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 PLXNB3Q9ULL4 1909 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 ZNF503Q96F45 646 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 P0C879 139 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
TNC-212ENST00000542877 E7EUB6 86 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 H3BT86 120 aa10.1□□□□□ -0.79
TNC-212ENST00000542877 PIFOQ8TCI5 191 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 CGB3P0DN86 165 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 C2orf70A6NJV1 201 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 UBE2BP63146 152 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 NCKAP5O14513 1909 aa10.09□□□□□ -0.79
TNC-212ENST00000542877 A0A1B0GXF2 115 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 IGHG2P01859 326 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 TNRC6AQ8NDV7 1962 aaKnown RBP10.08□□□□□ -0.8
TNC-212ENST00000542877 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 G3V4G9 280 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 TMEM89A2RUT3 159 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 LGALS9O00182 355 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 ATP5G1P05496 136 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 Q8N7P7 452 aa10.08□□□□□ -0.8
TNC-212ENST00000542877 IGHV4-30-2A0A087WSY4 118 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 FAM236AA0A1B0GUQ0 79 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 FAM236BA0A1B0GV22 79 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 A0A1B0GX51 115 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
TNC-212ENST00000542877 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
TNC-212ENST00000542877 C10orf105Q8TEF2 133 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 A0A087WW49 117 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 IGKV3D-7A0A0C4DH55 119 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 SPART-AS1P0CW21 52 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 ZGRF1Q86YA3 2104 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 DAND5Q8N907 189 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
TNC-212ENST00000542877 CXCL5P42830 114 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 PSMB8P28062 276 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 CGB7P0DN87 165 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 FANCD2OSQ96PS1 177 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 IGHV4-4A0A075B6R2 117 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 IGLV2-8P01709 118 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 DEFB113Q30KQ7 82 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
TNC-212ENST00000542877 SMIM20Q8N5G0 67 aa10.04□□□□□ -0.8
TNC-212ENST00000542877 RPL18AQ02543 176 aaKnown RBP10.04□□□□□ -0.8
TNC-212ENST00000542877 Q9HAA7 133 aa10.04□□□□□ -0.8
TNC-212ENST00000542877 DYSFO75923 2080 aa10.04□□□□□ -0.8
TNC-212ENST00000542877 SPRY4Q9C004 299 aa10.04□□□□□ -0.8
TNC-212ENST00000542877 NDUFS5O43920 106 aa10.04□□□□□ -0.8
TNC-212ENST00000542877 LECT2O14960 151 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 NACAE9PAV3 2078 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 ZFP36P26651 326 aaKnown RBP10.03□□□□□ -0.8
TNC-212ENST00000542877 NREPQ16612 68 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 COL4A3Q01955 1670 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
TNC-212ENST00000542877 NDUFA1O15239 70 aa10.02□□□□□ -0.8
TNC-212ENST00000542877 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.8
TNC-212ENST00000542877 SIRPDQ9H106 197 aa10.02□□□□□ -0.8
TNC-212ENST00000542877 A0A0J9YX75 114 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 MSMPQ1L6U9 139 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 J3KT08 172 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 ADORA2A-AS1P86434 159 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 DAZAP2Q15038 168 aaPredicted RBP10.02□□□□□ -0.81
TNC-212ENST00000542877 IGHV3-30-3P0DP02 117 aa10.02□□□□□ -0.81
TNC-212ENST00000542877 LOXL1Q08397 574 aaPredicted RBP10.01□□□□□ -0.81
TNC-212ENST00000542877 MP68P56378 58 aa10.01□□□□□ -0.81
TNC-212ENST00000542877 MLST8Q9BVC4 326 aa10.01□□□□□ -0.81
TNC-212ENST00000542877 MDFICQ9P1T7 246 aa10.01□□□□□ -0.81
TNC-212ENST00000542877 BRWD1-AS2P59051 145 aa10□□□□□ -0.81
TNC-212ENST00000542877 LINC00322Q6ZN03 302 aaPredicted RBP10□□□□□ -0.81
TNC-212ENST00000542877 MIR7-3HGQ8N6C7 128 aa10□□□□□ -0.81
TNC-212ENST00000542877 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
TNC-212ENST00000542877 IGHV3-30P01768 117 aa10□□□□□ -0.81
TNC-212ENST00000542877 IGHV3-33P01772 117 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms