RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 TRBV7-1A0A0A6YYK4 115 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 TMEM170BQ5T4T1 132 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 C9orf47Q6ZRZ4 202 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 AJUBAQ96IF1 538 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 HIST2H2BDQ6DRA6 164 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 DPH3P1Q9H4G8 78 aa11.59□□□□□ -0.55
CNOT9-208ENST00000542068 KHDC1LQ5JSQ8 128 aa11.58□□□□□ -0.56
CNOT9-208ENST00000542068 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
CNOT9-208ENST00000542068 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-208ENST00000542068 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
CNOT9-208ENST00000542068 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
CNOT9-208ENST00000542068 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 NDUFS8O00217 210 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 MORN3Q6PF18 240 aaPredicted RBP11.57□□□□□ -0.56
CNOT9-208ENST00000542068 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 MRAP2Q96G30 205 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 TOMM6Q96B49 74 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
CNOT9-208ENST00000542068 C11orf86A6NJI1 115 aa11.56□□□□□ -0.56
CNOT9-208ENST00000542068 OPRPNQ99935 248 aaPredicted RBP11.56□□□□□ -0.56
CNOT9-208ENST00000542068 MUC4Q99102 2169 aa11.56□□□□□ -0.56
CNOT9-208ENST00000542068 SCGB1C2P0DMR2 95 aa11.56□□□□□ -0.56
CNOT9-208ENST00000542068 SYT8Q8NBV8 401 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 AVPP01185 164 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 GPHB5Q86YW7 130 aa11.55□□□□□ -0.56
CNOT9-208ENST00000542068 TAL2Q16559 108 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 IGHV4-59P01825 116 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 MSMBP08118 114 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 CD7P09564 240 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 RAX2Q96IS3 184 aa11.54□□□□□ -0.56
CNOT9-208ENST00000542068 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
CNOT9-208ENST00000542068 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
CNOT9-208ENST00000542068 TSPAN13O95857 204 aa11.52□□□□□ -0.56
CNOT9-208ENST00000542068 PRO0461Q9UI25 63 aa11.52□□□□□ -0.56
CNOT9-208ENST00000542068 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
CNOT9-208ENST00000542068 NF1P21359 2839 aa11.52□□□□□ -0.57
CNOT9-208ENST00000542068 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.57
CNOT9-208ENST00000542068 FBN2P35556 2912 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 CIDEAO60543 219 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
CNOT9-208ENST00000542068 FAM159AQ6UWV7 190 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 PRORYQ9H606 182 aa11.51□□□□□ -0.57
CNOT9-208ENST00000542068 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 CRYGDP07320 174 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 BEX4Q9NWD9 120 aaPredicted RBP11.5□□□□□ -0.57
CNOT9-208ENST00000542068 U3KQE9 123 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 MXRA5Q9NR99 2828 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 HIVEP2P31629 2446 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 TMEM238LA0A1B0GVL6 79 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 A6NJY4 79 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 TSHBP01222 138 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 CKS1BP61024 79 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 FAM223BA6NKX1 122 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 ZNF56Q15929 161 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 FAM223AQ8IWN6 122 aa11.5□□□□□ -0.57
CNOT9-208ENST00000542068 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 OVOL1O14753 267 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
CNOT9-208ENST00000542068 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 HERVK_113P61574 105 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 FOXI1Q12951 378 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 KLK9Q9UKQ9 250 aa11.49□□□□□ -0.57
CNOT9-208ENST00000542068 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 C11orf44Q8N8P7 122 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 MT-ATP8P03928 68 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 SYNJ2BPP57105 145 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 TRAV2A0A0B4J234 112 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 DUX3Q96PT4 197 aa11.48□□□□□ -0.57
CNOT9-208ENST00000542068 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
CNOT9-208ENST00000542068 TCL1BO95988 128 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 A0A1B0GV72 72 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
CNOT9-208ENST00000542068 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 B4DSR2 109 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 NDUFA4O00483 81 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 Q1RN00 199 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 CFAP126Q5VTH2 177 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 ZNRF2Q8NHG8 242 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms