RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SAMD10Q9BYL1 202 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 U3KQK5 164 aa6.63□□□□□ -1.35
DDX55-208ENST00000541259 IGHV4-4A0A075B6R2 117 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 TGIF2-C20orf24A0A0A6YYL0 155 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 CXorf65A6NEN9 183 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 IGHV3-53P01767 116 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
DDX55-208ENST00000541259 C12orf74Q32Q52 190 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 LGALS9BQ3B8N2 356 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 YPEL4Q96NS1 127 aa6.62□□□□□ -1.35
DDX55-208ENST00000541259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
DDX55-208ENST00000541259 TRGV2A0A075B6R0 118 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 A0A087WWL8 130 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 RS1O15537 224 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 PAX4O43316 350 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 CRYGDP07320 174 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 EVI2AP22794 236 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 S100PP25815 95 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 CAMPP49913 170 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 DAD1P61803 113 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 ELOBQ15370 118 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 CFAP126Q5VTH2 177 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 KCNIP4Q6PIL6 250 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
DDX55-208ENST00000541259 C11orf45Q8TAV5 145 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 BORCS7Q96B45 105 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 ZNF479Q96JC4 524 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 EDA2RQ9HAV5 297 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 SMCO4Q9NRQ5 59 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 KIF25-AS1Q9Y6Z4 181 aa6.61□□□□□ -1.35
DDX55-208ENST00000541259 LINC00315P59091 139 aa6.6□□□□□ -1.35
DDX55-208ENST00000541259 RIGQ13278 110 aa6.6□□□□□ -1.35
DDX55-208ENST00000541259 PIK3CD-AS1Q5SR53 167 aa6.6□□□□□ -1.35
DDX55-208ENST00000541259 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
DDX55-208ENST00000541259 OR4C5Q8NGB2 326 aa6.6□□□□□ -1.35
DDX55-208ENST00000541259 TRAV9-1A0A075B6T8 112 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 TRAV4A0A0B4J268 109 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 A8MWV9 139 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 HTN3P15516 51 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 HOXA5P20719 270 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 FAM74A4Q5TZK3 123 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 Q6ZSN1 163 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 Q6ZTC4 211 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 ATP5L2Q7Z4Y8 100 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
DDX55-208ENST00000541259 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 TRGC1P0CF51 173 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 HBBP68871 147 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 FHL2Q14192 279 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 TMEM136Q6ZRR5 245 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 RNF185Q96GF1 192 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 C18orf15Q96N68 181 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
DDX55-208ENST00000541259 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
DDX55-208ENST00000541259 A0A1B0GW15 77 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 COLCA2A8K830 154 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 ATP5G1P05496 136 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 MGPP08493 103 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 SMIM17P0DL12 118 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 RAB4BP61018 213 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 GATD1Q8NB37 220 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 FAM210BQ96KR6 192 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 Q9UF83 564 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 STARD9Q9P2P6 4700 aa6.57□□□□□ -1.36
DDX55-208ENST00000541259 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 TRGV4A0A0C4DH28 118 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 F5H697 171 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 F5H768 121 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 GAS8-AS1O95177 125 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 RAB4AP20338 218 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 ZNF56Q15929 161 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 ZFP2Q6ZN57 461 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
DDX55-208ENST00000541259 A0A0J9YY99 117 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 SMKR1H3BMG3 65 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 RHODO00212 210 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 S100A8P05109 93 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 P0DMU3 169 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
DDX55-208ENST00000541259 SLAQ13239 276 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 MRPL51Q4U2R6 128 aaKnown RBP6.55□□□□□ -1.36
DDX55-208ENST00000541259 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 RASL11AQ6T310 242 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 SLC25A29Q8N8R3 303 aa6.55□□□□□ -1.36
DDX55-208ENST00000541259 DEFB131BA0A096LNP1 70 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms