RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
CACNB3-203ENST00000540990 M0QY20 66 aa12.46□□□□□ -0.41
CACNB3-203ENST00000540990 ZNF688P0C7X2 276 aa12.46□□□□□ -0.41
CACNB3-203ENST00000540990 HERVK_113P61574 105 aa12.46□□□□□ -0.41
CACNB3-203ENST00000540990 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
CACNB3-203ENST00000540990 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.41
CACNB3-203ENST00000540990 A0A087WWL8 130 aa12.46□□□□□ -0.42
CACNB3-203ENST00000540990 ELANEP08246 267 aa12.46□□□□□ -0.42
CACNB3-203ENST00000540990 UBE2D1P51668 147 aa12.46□□□□□ -0.42
CACNB3-203ENST00000540990 ZNF876PQ49A33 203 aa12.46□□□□□ -0.42
CACNB3-203ENST00000540990 SELENOKQ9Y6D0 94 aa12.46□□□□□ -0.42
CACNB3-203ENST00000540990 FSHBP01225 129 aa12.45□□□□□ -0.42
CACNB3-203ENST00000540990 C10orf99Q6UWK7 81 aa12.45□□□□□ -0.42
CACNB3-203ENST00000540990 EDA2RQ9HAV5 297 aa12.45□□□□□ -0.42
CACNB3-203ENST00000540990 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
CACNB3-203ENST00000540990 ASH1LQ9NR48 2969 aaKnown RBP12.45□□□□□ -0.42
CACNB3-203ENST00000540990 TMEM238LA0A1B0GVL6 79 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 A6NJY4 79 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
CACNB3-203ENST00000540990 NFE4Q86UQ8 179 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 Q8N1Y9 231 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 SPANXB1Q9NS25 103 aaPredicted RBP12.44□□□□□ -0.42
CACNB3-203ENST00000540990 F5H697 171 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
CACNB3-203ENST00000540990 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
CACNB3-203ENST00000540990 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
CACNB3-203ENST00000540990 A8MTW9 85 aa12.43□□□□□ -0.42
CACNB3-203ENST00000540990 WFDC12Q8WWY7 111 aa12.43□□□□□ -0.42
CACNB3-203ENST00000540990 PRO0461Q9UI25 63 aa12.43□□□□□ -0.42
CACNB3-203ENST00000540990 AGRNO00468 2067 aa12.43□□□□□ -0.42
CACNB3-203ENST00000540990 A0A0J9YY99 117 aa12.42□□□□□ -0.42
CACNB3-203ENST00000540990 SCGB2A2Q13296 93 aa12.42□□□□□ -0.42
CACNB3-203ENST00000540990 CD300EQ496F6 205 aaPredicted RBP12.42□□□□□ -0.42
CACNB3-203ENST00000540990 UBE2E2Q96LR5 201 aa12.42□□□□□ -0.42
CACNB3-203ENST00000540990 VPREB3Q9UKI3 123 aa12.42□□□□□ -0.42
CACNB3-203ENST00000540990 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 TEX48A0A1B0GUV7 120 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 NCOR2Q9Y618 2525 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 SPTAN1Q13813 2472 aaKnown RBP12.41□□□□□ -0.42
CACNB3-203ENST00000540990 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 SYNJ2BPP57105 145 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 ZNF702PQ9H963 129 aa12.41□□□□□ -0.42
CACNB3-203ENST00000540990 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
CACNB3-203ENST00000540990 AMELXQ99217 191 aa12.4□□□□□ -0.42
CACNB3-203ENST00000540990 P0DMU3 169 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 FAM231AP0DMU4 169 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 FAM231CP0DMU5 169 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 WFDC2Q14508 124 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 ZNF56Q15929 161 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 SPINK13Q1W4C9 94 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 Q6YL49 198 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 H3BMG7 143 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-203ENST00000540990 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
CACNB3-203ENST00000540990 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 SLC25A29Q8N8R3 303 aa12.39□□□□□ -0.43
CACNB3-203ENST00000540990 ITPR1Q14643 2758 aa12.38□□□□□ -0.43
CACNB3-203ENST00000540990 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
CACNB3-203ENST00000540990 TSPEAR-AS2P59090 65 aa12.38□□□□□ -0.43
CACNB3-203ENST00000540990 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
CACNB3-203ENST00000540990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.38□□□□□ -0.43
CACNB3-203ENST00000540990 SVEP1Q4LDE5 3571 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 I3L3M4 83 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 IGKV3-20P01619 116 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
CACNB3-203ENST00000540990 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 NRGNQ92686 78 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 PTH2Q96A98 100 aa12.37□□□□□ -0.43
CACNB3-203ENST00000540990 SPAG8Q99932 426 aaPredicted RBP12.37□□□□□ -0.43
CACNB3-203ENST00000540990 TMEM223A0PJW6 202 aa12.36□□□□□ -0.43
CACNB3-203ENST00000540990 EMP1P54849 157 aa12.36□□□□□ -0.43
CACNB3-203ENST00000540990 UBE2D3P61077 147 aa12.36□□□□□ -0.43
CACNB3-203ENST00000540990 UBE2D2P62837 147 aa12.36□□□□□ -0.43
CACNB3-203ENST00000540990 Q5PR19 223 aa12.36□□□□□ -0.43
CACNB3-203ENST00000540990 J3QQQ9 107 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 LEPROTO15243 131 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 TGFAP01135 160 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 CRYBA4P53673 196 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 Q8N2B8 174 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 PYGO1Q9Y3Y4 419 aa12.35□□□□□ -0.43
CACNB3-203ENST00000540990 J3QR89 54 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 TSPAN13O95857 204 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
CACNB3-203ENST00000540990 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
CACNB3-203ENST00000540990 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
CACNB3-203ENST00000540990 DOPEY1Q5JWR5 2465 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
CACNB3-203ENST00000540990 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
CACNB3-203ENST00000540990 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms