RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 UFSP1Q6NVU6 142 aa17.45■□□□□ 0.38
CHFR-218ENST00000540963 KLK12Q9UKR0 248 aa17.44■□□□□ 0.38
CHFR-218ENST00000540963 IGKV3D-20A0A0C4DH25 116 aa17.43■□□□□ 0.38
CHFR-218ENST00000540963 LGALSLQ3ZCW2 172 aaPredicted RBP17.43■□□□□ 0.38
CHFR-218ENST00000540963 SAPCD1Q5SSQ6 148 aa17.43■□□□□ 0.38
CHFR-218ENST00000540963 SAMD10Q9BYL1 202 aa17.43■□□□□ 0.38
CHFR-218ENST00000540963 CTXND1A0A1B0GTU2 59 aa17.42■□□□□ 0.38
CHFR-218ENST00000540963 RHODO00212 210 aa17.42■□□□□ 0.38
CHFR-218ENST00000540963 S100A4P26447 101 aaKnown RBP17.42■□□□□ 0.38
CHFR-218ENST00000540963 RPL37AP61513 92 aaKnown RBP17.42■□□□□ 0.38
CHFR-218ENST00000540963 Q9UF83 564 aa17.42■□□□□ 0.38
CHFR-218ENST00000540963 BORCS7-ASMTA0A0B4J1R7 106 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 SMLR1H3BR10 107 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 CRIP1P50238 77 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 UBE2G2P60604 165 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 Q0VG73 95 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 C14orf178Q8N769 122 aaPredicted RBP17.41■□□□□ 0.38
CHFR-218ENST00000540963 DNAJC30Q96LL9 226 aa17.41■□□□□ 0.38
CHFR-218ENST00000540963 A0A087WX48 190 aa17.4■□□□□ 0.38
CHFR-218ENST00000540963 FAM74A7A6NL05 159 aa17.4■□□□□ 0.38
CHFR-218ENST00000540963 UBE2WQ96B02 151 aa17.4■□□□□ 0.38
CHFR-218ENST00000540963 IL36BQ9NZH7 164 aa17.4■□□□□ 0.38
CHFR-218ENST00000540963 ARL2-SNX15V9GYD0 113 aa17.39■□□□□ 0.37
CHFR-218ENST00000540963 ASIPP42127 132 aa17.38■□□□□ 0.37
CHFR-218ENST00000540963 KCNIP4Q6PIL6 250 aa17.38■□□□□ 0.37
CHFR-218ENST00000540963 ARPC5O15511 151 aa17.37■□□□□ 0.37
CHFR-218ENST00000540963 RGS21Q2M5E4 152 aa17.37■□□□□ 0.37
CHFR-218ENST00000540963 FABP5P3A8MUU1 101 aa17.36■□□□□ 0.37
CHFR-218ENST00000540963 PEX7O00628 323 aa17.36■□□□□ 0.37
CHFR-218ENST00000540963 FHITP49789 147 aa17.36■□□□□ 0.37
CHFR-218ENST00000540963 JPT2Q9H910 190 aa17.36■□□□□ 0.37
CHFR-218ENST00000540963 DNLZQ5SXM8 178 aa17.35■□□□□ 0.37
CHFR-218ENST00000540963 DMRTA1Q5VZB9 504 aa17.35■□□□□ 0.37
CHFR-218ENST00000540963 Q86TA4 180 aa17.35■□□□□ 0.37
CHFR-218ENST00000540963 DAZAP1Q96EP5 407 aaKnown RBP17.35■□□□□ 0.37
CHFR-218ENST00000540963 C1orf43Q9BWL3 253 aa17.35■□□□□ 0.37
CHFR-218ENST00000540963 IFNA7P01567 189 aa17.34■□□□□ 0.37
CHFR-218ENST00000540963 AKR1C8PQ5T2L2 129 aa17.34■□□□□ 0.37
CHFR-218ENST00000540963 COX8CQ7Z4L0 72 aa17.34■□□□□ 0.37
CHFR-218ENST00000540963 ZC2HC1AQ96GY0 325 aa17.34■□□□□ 0.37
CHFR-218ENST00000540963 TRBV10-1A0A0K0K1A3 114 aa17.33■□□□□ 0.36
CHFR-218ENST00000540963 OR11H4Q8NGC9 324 aa17.33■□□□□ 0.36
CHFR-218ENST00000540963 MAP1LC3B2A6NCE7 125 aa17.32■□□□□ 0.36
CHFR-218ENST00000540963 HNRNPA3P51991 378 aaKnown RBP17.32■□□□□ 0.36
CHFR-218ENST00000540963 MAP1LC3BQ9GZQ8 125 aa17.32■□□□□ 0.36
CHFR-218ENST00000540963 DGAT2L7PQ6IED9 249 aa17.31■□□□□ 0.36
CHFR-218ENST00000540963 HIST1H2BAQ96A08 127 aa17.31■□□□□ 0.36
CHFR-218ENST00000540963 KRBOX1C9JBD0 128 aa17.3■□□□□ 0.36
CHFR-218ENST00000540963 SFRP2Q96HF1 295 aa17.3■□□□□ 0.36
CHFR-218ENST00000540963 B4DEV8 164 aa17.29■□□□□ 0.36
CHFR-218ENST00000540963 H3BVH4 76 aa17.29■□□□□ 0.36
CHFR-218ENST00000540963 RPL36AP83881 106 aaKnown RBP17.29■□□□□ 0.36
CHFR-218ENST00000540963 FAM74A4Q5TZK3 123 aa17.29■□□□□ 0.36
CHFR-218ENST00000540963 KCNRGQ8N5I3 272 aa17.29■□□□□ 0.36
CHFR-218ENST00000540963 RPL36ALQ969Q0 106 aaKnown RBP17.29■□□□□ 0.36
CHFR-218ENST00000540963 TRBV7-3A0A075B6L6 115 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 SH2D1AO60880 128 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 MT1HL1P0DM35 61 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 UBE2D3P61077 147 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 UBE2D2P62837 147 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 ENHOQ6UWT2 76 aa17.28■□□□□ 0.36
CHFR-218ENST00000540963 NKX6-2Q9C056 277 aaPredicted RBP17.28■□□□□ 0.36
CHFR-218ENST00000540963 CRPP02741 224 aa17.27■□□□□ 0.36
CHFR-218ENST00000540963 ARMS2P0C7Q2 107 aa17.27■□□□□ 0.36
CHFR-218ENST00000540963 Q6ZRU5 148 aa17.27■□□□□ 0.36
CHFR-218ENST00000540963 C9orf163Q8N9P6 203 aa17.27■□□□□ 0.36
CHFR-218ENST00000540963 GRIFINA4D1Z8 144 aa17.26■□□□□ 0.35
CHFR-218ENST00000540963 USP17L23D6RBM5 183 aa17.26■□□□□ 0.35
CHFR-218ENST00000540963 M0R036 132 aa17.26■□□□□ 0.35
CHFR-218ENST00000540963 ZFP30Q9Y2G7 519 aa17.26■□□□□ 0.35
CHFR-218ENST00000540963 TRBV6-1A0A0K0K1D8 114 aa17.25■□□□□ 0.35
CHFR-218ENST00000540963 ZNF674Q2M3X9 581 aa17.25■□□□□ 0.35
CHFR-218ENST00000540963 OR10G8Q8NGN5 311 aa17.25■□□□□ 0.35
CHFR-218ENST00000540963 MBD3L1Q8WWY6 194 aa17.25■□□□□ 0.35
CHFR-218ENST00000540963 PHLDA3Q9Y5J5 127 aa17.25■□□□□ 0.35
CHFR-218ENST00000540963 A0A087WWL8 130 aa17.24■□□□□ 0.35
CHFR-218ENST00000540963 TRBV6-8A0A0A6YYG3 113 aa17.24■□□□□ 0.35
CHFR-218ENST00000540963 TMEM262E9PQX1 116 aa17.24■□□□□ 0.35
CHFR-218ENST00000540963 LTAP01374 205 aa17.24■□□□□ 0.35
CHFR-218ENST00000540963 PKIAP61925 76 aa17.24■□□□□ 0.35
CHFR-218ENST00000540963 PAGE4O60829 102 aa17.23■□□□□ 0.35
CHFR-218ENST00000540963 ZNF345Q14585 488 aa17.23■□□□□ 0.35
CHFR-218ENST00000540963 MIAQ16674 131 aa17.23■□□□□ 0.35
CHFR-218ENST00000540963 FMC1Q96HJ9 113 aa17.23■□□□□ 0.35
CHFR-218ENST00000540963 A0A0D9SG52 128 aa17.22■□□□□ 0.35
CHFR-218ENST00000540963 PRSS1P07477 247 aa17.22■□□□□ 0.35
CHFR-218ENST00000540963 CST9LP1Q5W188 147 aa17.22■□□□□ 0.35
CHFR-218ENST00000540963 C15orf54Q8N8G6 183 aa17.22■□□□□ 0.35
CHFR-218ENST00000540963 HMSDA8MTL9 139 aa17.21■□□□□ 0.35
CHFR-218ENST00000540963 TPT1P13693 172 aaKnown RBP17.21■□□□□ 0.35
CHFR-218ENST00000540963 RPL19P84098 196 aaKnown RBP17.21■□□□□ 0.35
CHFR-218ENST00000540963 FAM162BQ5T6X4 162 aa17.21■□□□□ 0.35
CHFR-218ENST00000540963 ZFP82Q8N141 532 aa17.21■□□□□ 0.35
CHFR-218ENST00000540963 ANGP03950 147 aaKnown RBP17.2■□□□□ 0.34
CHFR-218ENST00000540963 LINC01559Q495D7 138 aa17.2■□□□□ 0.34
CHFR-218ENST00000540963 MPV17L2Q567V2 206 aa17.2■□□□□ 0.34
CHFR-218ENST00000540963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.2■□□□□ 0.34
CHFR-218ENST00000540963 TMSB15BA0A087X1C1 80 aa17.19■□□□□ 0.34
CHFR-218ENST00000540963 HLA-DQA1P01909 254 aa17.19■□□□□ 0.34
CHFR-218ENST00000540963 FAM213BQ8TBF2 198 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms