RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 Q9H521 79 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 MCUBQ9NWR8 336 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 RABL2AQ9UBK7 228 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-214ENST00000540865 WDR83OSQ9Y284 106 aa2.85□□□□□ -1.95
SNHG1-214ENST00000540865 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-214ENST00000540865 FAM231BA6NCW3 169 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 A8MWV9 139 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 TMEM262E9PQX1 116 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 H7C1H1 209 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 CCSO14618 274 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 HLA-DQA1P01909 254 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 CHTF8P0CG12 524 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 PPP1R1AQ13522 171 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 ZNF506Q5JVG8 444 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 C15orf54Q8N8G6 183 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 OR10G7Q8NGN6 311 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 FAM167A-AS1Q96KT0 104 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 C9orf85Q96MD7 179 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 SAMD10Q9BYL1 202 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 MIXL1Q9H2W2 232 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 PARLQ9H300 379 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 VCX3AQ9NNX9 186 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 Q9UF83 564 aa2.84□□□□□ -1.95
SNHG1-214ENST00000540865 TRAV26-2A0A0B4J265 109 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 TCRBP04435 133 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 FAUP35544 74 aaKnown RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 LINC01547P58512 204 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 PKIAP61925 76 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 RPL24P83731 157 aaKnown RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 GAGE2BQ13066 116 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 GAGE2EQ4V326 116 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 GAGE2AQ6NT46 116 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 UFSP1Q6NVU6 142 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 KRTAP26-1Q6PEX3 210 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 ZNF664Q8N3J9 261 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 C14orf178Q8N769 122 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 FXYD5Q96DB9 178 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 PHYHIPLQ96FC7 376 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 SLC25A21Q9BQT8 299 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 FUNDC2Q9BWH2 189 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 UQCC1Q9NVA1 299 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 GAGE2DQ9UEU5 116 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 RSL24D1Q9UHA3 163 aaKnown RBP2.83□□□□□ -1.96
SNHG1-214ENST00000540865 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
SNHG1-214ENST00000540865 A0A087WXM4 84 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 TRBV6-8A0A0A6YYG3 113 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 RGS5O15539 181 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 ANGP03950 147 aaKnown RBP2.82□□□□□ -1.96
SNHG1-214ENST00000540865 VPREB1P12018 145 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 RNASE3P12724 160 aaKnown RBP2.82□□□□□ -1.96
SNHG1-214ENST00000540865 RANP62826 216 aaKnown RBP2.82□□□□□ -1.96
SNHG1-214ENST00000540865 BAXQ07812 192 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 IL18Q14116 193 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 PRR4Q16378 134 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 IAH1Q2TAA2 248 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-214ENST00000540865 MAJINQ3KP22 176 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 MPV17L2Q567V2 206 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 GCSAMLQ5JQS6 135 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 Q6ZRP5 223 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 MIR17HGQ75NE6 70 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 ARL6IP6Q8N6S5 226 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 STPG4Q8N801 248 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 TMEM75Q8N9X5 138 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 OR2G3Q8NGZ4 309 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 TVP23CQ96ET8 276 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 TREM1Q9NP99 234 aa2.82□□□□□ -1.96
SNHG1-214ENST00000540865 IGLV10-54A0A075B6I4 117 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 TRBV10-1A0A0K0K1A3 114 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 UBE2L5PA0A1B0GUS4 154 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 C9orf170A2RU37 121 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 F6UZH7 168 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 L7N2F9 121 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 NDUFS6O75380 124 aaKnown RBP2.81□□□□□ -1.96
SNHG1-214ENST00000540865 CST7O76096 145 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 IFNA7P01567 189 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 S100A11P31949 105 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 BCAP31P51572 246 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 AP3S2P59780 193 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 S100A10P60903 97 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 UBE2D3P61077 147 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 SNRPEP62304 92 aaKnown RBP2.81□□□□□ -1.96
SNHG1-214ENST00000540865 UBE2D2P62837 147 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 COX6A2Q02221 97 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 LGALSLQ3ZCW2 172 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-214ENST00000540865 SPANXN2Q5MJ10 180 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 MCFD2Q8NI22 146 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 LYPD6BQ8NI32 183 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 DIRAS2Q96HU8 199 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 SLIRPQ9GZT3 109 aaKnown RBP2.81□□□□□ -1.96
SNHG1-214ENST00000540865 OTORQ9NRC9 128 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 LYRM2Q9NU23 88 aaPredicted RBP2.81□□□□□ -1.96
SNHG1-214ENST00000540865 GSKIPQ9P0R6 139 aa2.81□□□□□ -1.96
SNHG1-214ENST00000540865 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
SNHG1-214ENST00000540865 IGLV5-45A0A087WSX0 123 aa2.8□□□□□ -1.96
SNHG1-214ENST00000540865 TRAV8-4A0A0B4J246 113 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms