RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 LINC01619G3V211 115 aa5.46□□□□□ -1.54
KPNB1-203ENST00000540627 H3BUX3 64 aa5.46□□□□□ -1.54
KPNB1-203ENST00000540627 APRG1Q8IVJ8 170 aa5.46□□□□□ -1.54
KPNB1-203ENST00000540627 TRBV7-3A0A075B6L6 115 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 TEX48A0A1B0GUV7 120 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 F8W1H4 67 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 C19orf84I3L1E1 186 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 IGHV4-38-2P0DP08 117 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 PRADC1Q9BSG0 188 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 CYSLTR1Q9Y271 337 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 ID1P41134 155 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 RRN3P1Q2M238 152 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 SCGB1D4Q6XE38 83 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 LCNL1Q6ZST4 164 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 ABCA2Q9BZC7 2435 aa5.45□□□□□ -1.54
KPNB1-203ENST00000540627 A6NDX4 124 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 LINC01549A6NIU2 74 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 ZNF815PA8K554 130 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 H3BMG7 143 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 ELANEP08246 267 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 LGALS1P09382 135 aaKnown RBP5.44□□□□□ -1.54
KPNB1-203ENST00000540627 BLCAPP62952 87 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 NCOR2Q9Y618 2525 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 J3QR89 54 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 NXPH4O95158 308 aa5.44□□□□□ -1.54
KPNB1-203ENST00000540627 SPTBN4Q9H254 2564 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 IGHV4OR15-8A0A075B7B6 117 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 A0A087WW49 117 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 A0A1B0GWB2 263 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 KLLNB2CW77 178 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 DUSP14O95147 198 aaKnown RBP5.43□□□□□ -1.54
KPNB1-203ENST00000540627 PLA2G1BP04054 148 aaKnown RBP5.43□□□□□ -1.54
KPNB1-203ENST00000540627 SRSF9Q13242 221 aaKnown RBP eCLIP5.43□□□□□ -1.54
KPNB1-203ENST00000540627 WFDC2Q14508 124 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 PAPPA-AS1Q5QFB9 102 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 POM121L12Q8N7R1 296 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 KIR2DL4Q99706 377 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 TP53TG1Q9Y2A0 90 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 CHD8Q9HCK8 2581 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 IGLV1-40P01703 118 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 CD7P09564 240 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 HERVK_113P61574 105 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 RPL32P62910 135 aaKnown RBP5.43□□□□□ -1.54
KPNB1-203ENST00000540627 AMTNQ6UX39 209 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 KIF25-AS1Q9Y6Z4 181 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 MUC4Q99102 2169 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 TRAV12-3A0A0B4J271 114 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 K7EMT4 169 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 GNLYP22749 145 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 LINC00315P59091 139 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 ZFP2Q6ZN57 461 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 C10orf105Q8TEF2 133 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 CCL19Q99731 98 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 SPATA25Q9BR10 227 aa5.43□□□□□ -1.54
KPNB1-203ENST00000540627 SPANXB1Q9NS25 103 aaPredicted RBP5.43□□□□□ -1.54
KPNB1-203ENST00000540627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.42□□□□□ -1.542e-8■■■■■ 42.2
KPNB1-203ENST00000540627 TMEM238C9JI98 176 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 HERV-K104P63124 156 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 PMVKQ15126 192 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 JPT2Q9H910 190 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 MRPL16Q9NX20 251 aaKnown RBP5.42□□□□□ -1.54
KPNB1-203ENST00000540627 TRAV26-1A0A087WT03 109 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 C11orf86A6NJI1 115 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 CRYGDP07320 174 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 POLR2KP53803 58 aaKnown RBP5.42□□□□□ -1.54
KPNB1-203ENST00000540627 ETDBQ3ZM63 59 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 TMEM141Q96I45 108 aa5.42□□□□□ -1.54
KPNB1-203ENST00000540627 SDHAF1A6NFY7 115 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 IGIPA6NJ69 53 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 MSMBP08118 114 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 COX6B1P14854 86 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 EMP1P54849 157 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 ATP5J2P56134 94 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 KLHL30-AS1Q8NEE0 82 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 DCANP1Q8TF63 244 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 DEFB104AQ8WTQ1 72 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 SPG11Q96JI7 2443 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 TSHBP01222 138 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 RPL39P62891 51 aaKnown RBP5.41□□□□□ -1.54
KPNB1-203ENST00000540627 FAM74A4Q5TZK3 123 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 MORN3Q6PF18 240 aaPredicted RBP5.41□□□□□ -1.54
KPNB1-203ENST00000540627 PLEKHB2Q96CS7 222 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 TIMM17AQ99595 171 aa5.41□□□□□ -1.54
KPNB1-203ENST00000540627 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 ZNF688P0C7X2 276 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 SNRPD3P62318 126 aaKnown RBP5.4□□□□□ -1.54
KPNB1-203ENST00000540627 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 SH2D6Q7Z4S9 175 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 SYT8Q8NBV8 401 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 IGHV4-30-2A0A087WSY4 118 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 TRBV27A0A0K0K1C4 114 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 CFHR3Q02985 330 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 MTURNQ8N3F0 131 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 RNF183Q96D59 192 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 SIGMAR1Q99720 223 aa5.4□□□□□ -1.54
KPNB1-203ENST00000540627 LOC107984156A0A0G2JMH3 177 aa5.4□□□□□ -1.55
KPNB1-203ENST00000540627 LGALS9O00182 355 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms