RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 SSBP4Q9BWG4 385 aaPredicted RBP7.8□□□□□ -1.16
TMEM258-205ENST00000540434 A0A087WWL8 130 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 M0R381 172 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
TMEM258-205ENST00000540434 GNG4P50150 75 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 CCL18P55774 89 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 C14orf178Q8N769 122 aaPredicted RBP7.79□□□□□ -1.16
TMEM258-205ENST00000540434 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 Q9H8V8 135 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 ICOSQ9Y6W8 199 aa7.79□□□□□ -1.16
TMEM258-205ENST00000540434 SNAI2O43623 268 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 SLAQ13239 276 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 NUDT11Q96G61 164 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 SFRP2Q96HF1 295 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 RNASE7Q9H1E1 156 aaKnown RBP7.78□□□□□ -1.16
TMEM258-205ENST00000540434 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
TMEM258-205ENST00000540434 MRPS16Q9Y3D3 137 aaKnown RBP7.78□□□□□ -1.16
TMEM258-205ENST00000540434 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 NXPH4O95158 308 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 IGLC6P0CF74 106 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 CEBPGP53567 150 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
TMEM258-205ENST00000540434 PIK3CD-AS1Q5SR53 167 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
TMEM258-205ENST00000540434 PHLDA3Q9Y5J5 127 aa7.77□□□□□ -1.17
TMEM258-205ENST00000540434 TRBV6-4A0A1B0GX49 114 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 A8MWV9 139 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 CXCL1P09341 107 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 TAGLN2P37802 199 aaKnown RBP7.76□□□□□ -1.17
TMEM258-205ENST00000540434 FAM3BP58499 235 aaPredicted RBP7.76□□□□□ -1.17
TMEM258-205ENST00000540434 LINC00315P59091 139 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 ZFP2Q6ZN57 461 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 SPATA12Q7Z6I5 190 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 TNFRSF18Q9Y5U5 241 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 KIF25-AS1Q9Y6Z4 181 aa7.76□□□□□ -1.17
TMEM258-205ENST00000540434 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 SRIP30626 198 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 IFITM2Q01629 132 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 FAM74A4Q5TZK3 123 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 WFDC10BQ8IUB3 73 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 RNF213Q63HN8 5207 aa7.75□□□□□ -1.17
TMEM258-205ENST00000540434 GAGE12JA6NER3 117 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 P01737 135 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 GAGE1Q13065 139 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 GAGE4Q13068 117 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 GAGE5Q13069 117 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 GAGE13Q4V321 117 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 Q5VSD8 79 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 LYZL1Q6UWQ5 148 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 Q8N3U1 123 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 GTSF1Q8WW33 167 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 DAZAP1Q96EP5 407 aaKnown RBP7.74□□□□□ -1.17
TMEM258-205ENST00000540434 SMIM12Q96EX1 92 aa7.74□□□□□ -1.17
TMEM258-205ENST00000540434 J3QL48 77 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 RHOHQ15669 191 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 FER1L6-AS1Q8NA97 138 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 TPPP3Q9BW30 176 aa7.73□□□□□ -1.17
TMEM258-205ENST00000540434 SIVA1O15304 175 aa7.72□□□□□ -1.17
TMEM258-205ENST00000540434 CIDEAO60543 219 aa7.72□□□□□ -1.17
TMEM258-205ENST00000540434 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
TMEM258-205ENST00000540434 LINC01551Q86U37 167 aa7.72□□□□□ -1.17
TMEM258-205ENST00000540434 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
TMEM258-205ENST00000540434 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
TMEM258-205ENST00000540434 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
TMEM258-205ENST00000540434 NDUFS6O75380 124 aaKnown RBP7.71□□□□□ -1.18
TMEM258-205ENST00000540434 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
TMEM258-205ENST00000540434 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
TMEM258-205ENST00000540434 RPP21Q9H633 154 aaKnown RBP7.71□□□□□ -1.18
TMEM258-205ENST00000540434 NTF3P20783 257 aa7.7□□□□□ -1.18
TMEM258-205ENST00000540434 EVI2AP22794 236 aa7.7□□□□□ -1.18
TMEM258-205ENST00000540434 RPS20P60866 119 aaKnown RBP7.7□□□□□ -1.18
TMEM258-205ENST00000540434 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
TMEM258-205ENST00000540434 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
TMEM258-205ENST00000540434 C6orf223Q8N319 242 aa7.7□□□□□ -1.18
TMEM258-205ENST00000540434 RHODO00212 210 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 GATCO43716 136 aaKnown RBP7.69□□□□□ -1.18
TMEM258-205ENST00000540434 CTRLP40313 264 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 XGP55808 180 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 TIRAPP58753 221 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
TMEM258-205ENST00000540434 NEXN-AS1Q8NBZ9 246 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 GTSF1LQ9H1H1 148 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 LY96Q9Y6Y9 160 aa7.69□□□□□ -1.18
TMEM258-205ENST00000540434 DNAH10OSP0CZ25 163 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 FUSP35637 526 aaKnown RBP eCLIP7.68□□□□□ -1.18
TMEM258-205ENST00000540434 ERVFC1-1P60608 527 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 RAB4BP61018 213 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 UBE2D3P61077 147 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 UBE2D2P62837 147 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 ISOC2Q96AB3 205 aa7.68□□□□□ -1.18
TMEM258-205ENST00000540434 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms