RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 TGFAP01135 160 aa11.55□□□□□ -0.56
GABARAPL1-208ENST00000540424 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
GABARAPL1-208ENST00000540424 CCL19Q99731 98 aa11.55□□□□□ -0.56
GABARAPL1-208ENST00000540424 FAM223BA6NKX1 122 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 G3V318 75 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 ORM1P02763 201 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 FAM223AQ8IWN6 122 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 CHD6Q8TD26 2715 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 TRAV41A0A0B4J266 112 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 IGHV3-35A0A0C4DH35 117 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 A0A0J9YY99 117 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 SCGB3A1Q96QR1 104 aa11.54□□□□□ -0.56
GABARAPL1-208ENST00000540424 HRNRQ86YZ3 2850 aaPredicted RBP11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 P0DMU3 169 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 CRIP2P52943 208 aaPredicted RBP11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 ATP5J2P56134 94 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 TRAV2A0A0B4J234 112 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
GABARAPL1-208ENST00000540424 NBASA2RRP1 2371 aa11.52□□□□□ -0.56
GABARAPL1-208ENST00000540424 IGHV3OR16-8A0A075B7F1 116 aa11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 ERCC8Q13216 396 aa11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 Q8TAT8 98 aa11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 C10orf105Q8TEF2 133 aa11.52□□□□□ -0.57
GABARAPL1-208ENST00000540424 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 LGALS9O00182 355 aa11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 ATXN8Q156A1 80 aa11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
GABARAPL1-208ENST00000540424 DCHS2Q6V1P9 2916 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGHV4-61A0A0C4DH41 118 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 TRBV7-7A0A0K0K1E9 115 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGFL4Q6B9Z1 124 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 SLC25A29Q8N8R3 303 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 BAALCQ8WXS3 180 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 RELNP78509 3460 aa11.5□□□□□ -0.57
GABARAPL1-208ENST00000540424 TRGV3P03979 118 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 HERVK_113P61574 105 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 C19orf54Q5BKX5 351 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 HIVEP3Q5T1R4 2406 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGHV3OR16-10A0A075B7F0 116 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 H3BMM0 161 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 H3BUA1 57 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 U3KQE9 123 aa11.49□□□□□ -0.57
GABARAPL1-208ENST00000540424 TRBV10-2A0A0K0K1G8 114 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 FAM240AA0A1B0GVK7 77 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 M0R2P5 195 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGF1P05019 195 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 BRD3OSQ6XYD6 125 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 SPANXDQ9BXN6 97 aa11.48□□□□□ -0.57
GABARAPL1-208ENST00000540424 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 WIPF1O43516 503 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 TACC2O95359 2948 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 A0A0B4J2C4 111 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 CFAP46Q8IYW2 2715 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 LRRC75A-AS1Q8N1F1 130 aa11.47□□□□□ -0.57
GABARAPL1-208ENST00000540424 PRAC2D3DTV9 90 aa11.46□□□□□ -0.57
GABARAPL1-208ENST00000540424 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 NDUFA4O00483 81 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 Q6ZS46 218 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 C9orf139Q6ZV77 190 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 KLK15Q9H2R5 256 aa11.46□□□□□ -0.58
GABARAPL1-208ENST00000540424 WNK2Q9Y3S1 2297 aa11.45□□□□□ -0.58
GABARAPL1-208ENST00000540424 MSMBP08118 114 aa11.45□□□□□ -0.58
GABARAPL1-208ENST00000540424 DSCR9P59020 149 aa11.45□□□□□ -0.58
GABARAPL1-208ENST00000540424 C16orf92Q96LL3 132 aa11.45□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGHG2P01859 326 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 C9orf47Q6ZRZ4 202 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 AGPAT4-IT1Q9H0P7 198 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 A0A1B0GX51 115 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 A6NDX4 124 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGHV4-38-2P0DP08 117 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 IMUPQ9GZP8 106 aa11.44□□□□□ -0.58
GABARAPL1-208ENST00000540424 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms