RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 MRAPQ8TCY5 172 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 C20orf173Q96LM9 149 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 UBE2E2Q96LR5 201 aa7.31□□□□□ -1.24
CLIP1-212ENST00000540304 IGKV3-7A0A075B6H7 116 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 FAM181BA6NEQ2 426 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 F8W1H4 67 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 KLF5Q13887 457 aaPredicted RBP7.3□□□□□ -1.24
CLIP1-212ENST00000540304 HIST2H2BDQ6DRA6 164 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 FASNP49327 2511 aaKnown RBP7.3□□□□□ -1.24
CLIP1-212ENST00000540304 PDZD2O15018 2839 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 UNC79Q9P2D8 2635 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 OVOL1O14753 267 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 DEFB1P60022 68 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 MS4A6AQ9H2W1 248 aa7.3□□□□□ -1.24
CLIP1-212ENST00000540304 C2orf70A6NJV1 201 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 ORM1P02763 201 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 CSN3P07498 182 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 TCTAP57738 103 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 OR10J6PQ8NGY7 276 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 LENEPQ9Y5L5 61 aa7.29□□□□□ -1.24
CLIP1-212ENST00000540304 IGHV4OR15-8A0A075B7B6 117 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 A0A087WW49 117 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 RS1O15537 224 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 KRTAP1-1Q07627 177 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 PRELID3AQ96N28 172 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 EDA2RQ9HAV5 297 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 SORL1Q92673 2214 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 LGALS9O00182 355 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 RHODO00212 210 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 IGLC6P0CF74 106 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 FOXI1Q12951 378 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 LINC00477Q96M19 166 aa7.28□□□□□ -1.24
CLIP1-212ENST00000540304 DNAJC9-AS1A6NH13 148 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 C9JAW5 83 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 APOMO95445 188 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 H3BMG7 143 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 SRD5A1P18405 259 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 HOXD3P31249 432 aaPredicted RBP7.27□□□□□ -1.25
CLIP1-212ENST00000540304 SYNJ2BPP57105 145 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 Q6ZQT7 251 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 ZNF493Q6ZR52 646 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 ZNF575Q86XF7 245 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 OR13C6PQ8NH95 151 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 MAP1LC3AQ9H492 121 aa7.27□□□□□ -1.25
CLIP1-212ENST00000540304 EMP1P54849 157 aa7.26□□□□□ -1.25
CLIP1-212ENST00000540304 DCANP1Q8TF63 244 aa7.26□□□□□ -1.25
CLIP1-212ENST00000540304 LINC01587Q99440 93 aa7.26□□□□□ -1.25
CLIP1-212ENST00000540304 WNK1Q9H4A3 2382 aa7.26□□□□□ -1.25
CLIP1-212ENST00000540304 ANK3Q12955 4377 aaKnown RBP7.26□□□□□ -1.25
CLIP1-212ENST00000540304 OR8A1Q8NGG7 326 aa7.26□□□□□ -1.25
CLIP1-212ENST00000540304 IGKV3D-20A0A0C4DH25 116 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 SYS1-DBNDD2H3BUS1 97 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 IFITM1P13164 125 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 Q6ZSV7 163 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 TMEM70Q9BUB7 260 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 CNFNQ9BYD5 112 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.25
CLIP1-212ENST00000540304 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 F6UB75 175 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 J3KT08 172 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 HSBP1O75506 76 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 TWIST1Q15672 202 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 TTC32Q5I0X7 151 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 PRR9Q5T870 116 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 RASL10AQ92737 203 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 FAM19A4Q96LR4 140 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 C11orf21Q9P2W6 132 aa7.25□□□□□ -1.25
CLIP1-212ENST00000540304 COX8AP10176 69 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 EVI2AP22794 236 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 WFDC3Q8IUB2 231 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 C4orf3Q8WVX3 66 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 SIGLEC8Q9NYZ4 499 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 PRO0461Q9UI25 63 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 C18orf65Q6ZTR6 163 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 NFE4Q86UQ8 179 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 DUX3Q96PT4 197 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 ESM1Q9NQ30 184 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 AGRNO00468 2067 aa7.24□□□□□ -1.25
CLIP1-212ENST00000540304 LINC01619G3V211 115 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 GAGE2BQ13066 116 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 DEFB136Q30KP8 78 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 GAGE2EQ4V326 116 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 KHDC1LQ5JSQ8 128 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
CLIP1-212ENST00000540304 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 GAGE2DQ9UEU5 116 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 TRAV21A0A0B4J279 112 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 K7EQG2 157 aa7.23□□□□□ -1.25
CLIP1-212ENST00000540304 SLURP1P55000 103 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 325.9 ms