RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
NEK2-205ENST00000540251 PGLYRP4Q96LB8 373 aa12.9□□□□□ -0.34
NEK2-205ENST00000540251 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
NEK2-205ENST00000540251 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
NEK2-205ENST00000540251 PRO0255Q9UI72 69 aa12.9□□□□□ -0.34
NEK2-205ENST00000540251 MUC21A0A0G2JKD1 596 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 MUC21A0A140T8X8 626 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 APOC3P02656 99 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 TRGC1P0CF51 173 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 CRYBA4P53673 196 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 LINC00315P59091 139 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 AP1S3Q96PC3 154 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 SAMD10Q9BYL1 202 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
NEK2-205ENST00000540251 TRBV6-4A0A1B0GX49 114 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 SNAPINO95295 136 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 TRGV4A0A0C4DH28 118 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 A0A1B0GW15 77 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 IGHV3-53P01767 116 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 HTN3P15516 51 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
NEK2-205ENST00000540251 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
NEK2-205ENST00000540251 RAB4BP61018 213 aa12.87□□□□□ -0.35
NEK2-205ENST00000540251 RIGQ13278 110 aa12.87□□□□□ -0.35
NEK2-205ENST00000540251 TWIST1Q15672 202 aa12.87□□□□□ -0.35
NEK2-205ENST00000540251 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
NEK2-205ENST00000540251 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 A0A1B0GXF2 115 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 EVI2AP22794 236 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 TMEM88Q6PEY1 159 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 ATP5L2Q7Z4Y8 100 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 C14orf178Q8N769 122 aaPredicted RBP12.86□□□□□ -0.35
NEK2-205ENST00000540251 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 FRZBQ92765 325 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 APLNQ9ULZ1 77 aa12.86□□□□□ -0.35
NEK2-205ENST00000540251 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
NEK2-205ENST00000540251 A0A087WWL8 130 aa12.85□□□□□ -0.35
NEK2-205ENST00000540251 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
NEK2-205ENST00000540251 Q6ZSN1 163 aa12.85□□□□□ -0.35
NEK2-205ENST00000540251 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
NEK2-205ENST00000540251 IGLL5B9A064 214 aa12.84□□□□□ -0.35
NEK2-205ENST00000540251 PAX4O43316 350 aa12.84□□□□□ -0.35
NEK2-205ENST00000540251 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
NEK2-205ENST00000540251 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
NEK2-205ENST00000540251 SSTP61278 116 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 RHOHQ15669 191 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 FAM74A4Q5TZK3 123 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 RPS10P5Q9NQ39 176 aa12.83□□□□□ -0.36
NEK2-205ENST00000540251 IGHV3-73A0A0B4J1V6 119 aa12.82□□□□□ -0.36
NEK2-205ENST00000540251 S100A8P05109 93 aa12.82□□□□□ -0.36
NEK2-205ENST00000540251 RASL11AQ6T310 242 aa12.82□□□□□ -0.36
NEK2-205ENST00000540251 K7EQD1 137 aa12.81□□□□□ -0.36
NEK2-205ENST00000540251 HBBP68871 147 aa12.81□□□□□ -0.36
NEK2-205ENST00000540251 KCNIP4Q6PIL6 250 aa12.81□□□□□ -0.36
NEK2-205ENST00000540251 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
NEK2-205ENST00000540251 A0A096LPF7 62 aa12.8□□□□□ -0.36
NEK2-205ENST00000540251 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
NEK2-205ENST00000540251 MRPL23Q16540 153 aaKnown RBP12.8□□□□□ -0.36
NEK2-205ENST00000540251 A0A0J9YY99 117 aa12.79□□□□□ -0.36
NEK2-205ENST00000540251 M0QY20 66 aa12.79□□□□□ -0.36
NEK2-205ENST00000540251 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
NEK2-205ENST00000540251 PLECQ15149 4684 aaKnown RBP12.78□□□□□ -0.36
NEK2-205ENST00000540251 S100PP25815 95 aa12.78□□□□□ -0.36
NEK2-205ENST00000540251 ZNF56Q15929 161 aa12.78□□□□□ -0.36
NEK2-205ENST00000540251 ATRAIDQ6UW56 229 aa12.78□□□□□ -0.36
NEK2-205ENST00000540251 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
NEK2-205ENST00000540251 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
NEK2-205ENST00000540251 H7C1H1 209 aa12.77□□□□□ -0.37
NEK2-205ENST00000540251 GYPEP15421 78 aa12.77□□□□□ -0.37
NEK2-205ENST00000540251 RAB4AP20338 218 aa12.77□□□□□ -0.37
NEK2-205ENST00000540251 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.37
NEK2-205ENST00000540251 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
NEK2-205ENST00000540251 SUMO4Q6EEV6 95 aa12.76□□□□□ -0.37
NEK2-205ENST00000540251 DNAJC30Q96LL9 226 aa12.76□□□□□ -0.37
NEK2-205ENST00000540251 Q9UF83 564 aa12.76□□□□□ -0.37
NEK2-205ENST00000540251 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 F5H697 171 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 CAMPP49913 170 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 TIRAPP58753 221 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 NEGR1Q7Z3B1 354 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 YPEL4Q96NS1 127 aa12.75□□□□□ -0.37
NEK2-205ENST00000540251 TRBV24-1A0A075B6N3 115 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 LOC100131303A0A0U1RQF7 123 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 NUDT3O95989 172 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 MGPP08493 103 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 COX19Q49B96 90 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
NEK2-205ENST00000540251 SRIP30626 198 aa12.73□□□□□ -0.37
NEK2-205ENST00000540251 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
NEK2-205ENST00000540251 ELOBQ15370 118 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms