RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SCRT2Q9NQ03 307 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 PCNX3Q9H6A9 2034 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 BRWD1-AS2P59051 145 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 P0C879 139 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 C5orf56Q8N8D9 126 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
CACNB1-206ENST00000539338 F8WEM9 126 aa11.21□□□□□ -0.61
CACNB1-206ENST00000539338 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.61
CACNB1-206ENST00000539338 CRLF1O75462 422 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 CRYGCP07315 174 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 CFC1P0CG37 223 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 ZNF295-AS1Q8N0V1 137 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
CACNB1-206ENST00000539338 SPATA25Q9BR10 227 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 Q9H8V8 135 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
CACNB1-206ENST00000539338 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 PIFOQ8TCI5 191 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 TMEM131Q92545 1883 aa11.2□□□□□ -0.62
CACNB1-206ENST00000539338 PTPN13Q12923 2485 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 PRR14LQ5THK1 2151 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 A0A0J9YY99 117 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 XCL1P47992 114 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 A0A0J9YXV3 536 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
CACNB1-206ENST00000539338 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
CACNB1-206ENST00000539338 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
CACNB1-206ENST00000539338 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
CACNB1-206ENST00000539338 SH2D6Q7Z4S9 175 aa11.18□□□□□ -0.62
CACNB1-206ENST00000539338 IGLL5B9A064 214 aa11.18□□□□□ -0.62
CACNB1-206ENST00000539338 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
CACNB1-206ENST00000539338 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
CACNB1-206ENST00000539338 FXYD2P54710 66 aa11.17□□□□□ -0.62
CACNB1-206ENST00000539338 FANCD2OSQ96PS1 177 aa11.17□□□□□ -0.62
CACNB1-206ENST00000539338 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 A0A087WW49 117 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 Q8N1Y9 231 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 Q6ZQT7 251 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 C9orf47Q6ZRZ4 202 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 NKAPP1Q8N9T2 125 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 HAMPP81172 84 aa11.16□□□□□ -0.62
CACNB1-206ENST00000539338 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
CACNB1-206ENST00000539338 HILS1P60008 231 aa11.15□□□□□ -0.62
CACNB1-206ENST00000539338 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
CACNB1-206ENST00000539338 LINC00322Q6ZN03 302 aaPredicted RBP11.15□□□□□ -0.62
CACNB1-206ENST00000539338 CTRLP40313 264 aa11.15□□□□□ -0.62
CACNB1-206ENST00000539338 MUC22E2RYF6 1773 aaPredicted RBP11.15□□□□□ -0.63
CACNB1-206ENST00000539338 TRBV12-3P01733 135 aa11.15□□□□□ -0.63
CACNB1-206ENST00000539338 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.63
CACNB1-206ENST00000539338 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 C22orf34Q6ZV56 151 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 TRAV25A0A0B4J276 109 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 RS1O15537 224 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
CACNB1-206ENST00000539338 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 UBL5Q9BZL1 73 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 A4D1N5 150 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 IFITM1P13164 125 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
CACNB1-206ENST00000539338 CSPG4Q6UVK1 2322 aa11.12□□□□□ -0.63
CACNB1-206ENST00000539338 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
CACNB1-206ENST00000539338 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
CACNB1-206ENST00000539338 CHD8Q9HCK8 2581 aa11.12□□□□□ -0.63
CACNB1-206ENST00000539338 TNCP24821 2201 aa11.12□□□□□ -0.63
CACNB1-206ENST00000539338 C2orf70A6NJV1 201 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
CACNB1-206ENST00000539338 GDF5OSQ5U4N7 250 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 TNRC6AQ8NDV7 1962 aaKnown RBP11.11□□□□□ -0.63
CACNB1-206ENST00000539338 DAND5Q8N907 189 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 TM2D2Q9BX73 214 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
CACNB1-206ENST00000539338 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 LINC01548A6NM66 108 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 BAALC-AS2P0C853 105 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 ODF1Q14990 250 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
CACNB1-206ENST00000539338 K7EQD1 137 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
CACNB1-206ENST00000539338 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 TMEM126AQ9H061 195 aa11.1□□□□□ -0.63
CACNB1-206ENST00000539338 EIF4EBP1Q13541 118 aaPredicted RBP11.1□□□□□ -0.63
CACNB1-206ENST00000539338 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 IGHG2P01859 326 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 EP400Q96L91 3159 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 WFDC2Q14508 124 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 ANKRD29Q8N6D5 301 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 LINC00574Q9H8X3 128 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 ATRXP46100 2492 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms