RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 LINC01619G3V211 115 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 IGKV2D-40P01614 121 aaPredicted RBP6.65□□□□□ -1.34
DDB1-213ENST00000539332 CSN3P07498 182 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 EDN2P20800 178 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 FHL3Q13643 280 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 ORMDL3Q8N138 153 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 RNF182Q8N6D2 247 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 ZC2HC1AQ96GY0 325 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 DUX3Q96PT4 197 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 TNFRSF18Q9Y5U5 241 aa6.65□□□□□ -1.34
DDB1-213ENST00000539332 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 ZNF138P52744 262 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 SLURP1P55000 103 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 SYNJ2BPP57105 145 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 CD300EQ496F6 205 aaPredicted RBP6.64□□□□□ -1.35
DDB1-213ENST00000539332 FOXI2Q6ZQN5 318 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 C9orf47Q6ZRZ4 202 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 OR8A1Q8NGG7 326 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 PRR25Q96S07 402 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 VGLL1Q99990 258 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 PKD1L1Q8TDX9 2849 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 CCL24O00175 119 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 NCR2O95944 276 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 CACNG7P62955 275 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 TAL2Q16559 108 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 NDUFA11Q86Y39 141 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 DCANP1Q8TF63 244 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 PRELID3AQ96N28 172 aa6.64□□□□□ -1.35
DDB1-213ENST00000539332 SPAG8Q99932 426 aaPredicted RBP6.64□□□□□ -1.35
DDB1-213ENST00000539332 A0A0U1RRA0 63 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 ARMS2P0C7Q2 107 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 CRIP1P50238 77 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
DDB1-213ENST00000539332 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 FAM104BQ5XKR9 115 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 LENEPQ9Y5L5 61 aa6.63□□□□□ -1.35
DDB1-213ENST00000539332 A0A096LNJ9 63 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 LINC01546A6NGU7 62 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 SNAI2O43623 268 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 IFI27P40305 119 aaPredicted RBP6.62□□□□□ -1.35
DDB1-213ENST00000539332 Q8TAT8 98 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 DLX4Q92988 240 aaPredicted RBP6.62□□□□□ -1.35
DDB1-213ENST00000539332 SPATA25Q9BR10 227 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
DDB1-213ENST00000539332 AGPAT4-IT1Q9H0P7 198 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 TIMM8BQ9Y5J9 83 aaPredicted RBP6.62□□□□□ -1.35
DDB1-213ENST00000539332 D6R8Y8 96 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 K7EQG2 157 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 OVOL1O14753 267 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 AZU1P20160 251 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 NMUP48645 174 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 SEC61GP60059 68 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 Q8N1Y9 231 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 TM2D2Q9BX73 214 aa6.62□□□□□ -1.35
DDB1-213ENST00000539332 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 TRAV2A0A0B4J234 112 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 TEX48A0A1B0GUV7 120 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 ATP5LO75964 103 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
DDB1-213ENST00000539332 ERCC8Q13216 396 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 TMEM158Q8WZ71 300 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 FAM19A4Q96LR4 140 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 NXT2Q9NPJ8 142 aaKnown RBP6.61□□□□□ -1.35
DDB1-213ENST00000539332 AGRNO00468 2067 aa6.61□□□□□ -1.35
DDB1-213ENST00000539332 E9PLD3 99 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 SH2D1AO60880 128 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 EVI2AP22794 236 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 GCSHP23434 173 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 ID1P41134 155 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
DDB1-213ENST00000539332 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
DDB1-213ENST00000539332 CKS2P33552 79 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 ZNF575Q86XF7 245 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 SPANXB1Q9NS25 103 aaPredicted RBP6.59□□□□□ -1.35
DDB1-213ENST00000539332 FCER1GP30273 86 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 TWIST1Q15672 202 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 CEND1Q8N111 149 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 C3orf56Q8N813 242 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 ATP6V0E2Q8NHE4 81 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
DDB1-213ENST00000539332 TRAV26-1A0A087WT03 109 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 FABP5P3A8MUU1 101 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 DPM2O94777 84 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 IGKCP01834 107 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
DDB1-213ENST00000539332 LYZL1Q6UWQ5 148 aa6.58□□□□□ -1.36
DDB1-213ENST00000539332 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms