RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 H7C1C5 153 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 CTSDP07339 412 aaPredicted RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 FGF7P21781 194 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 TPI1P60174 286 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 NCS1P62166 190 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 LCN6P62502 163 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ELOBQ15370 118 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 C1orf140Q5VVS0 124 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 AAED1Q7RTV5 226 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 Q8IYB0 196 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ACBD7Q8N6N7 88 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 MORN4Q8NDC4 146 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 STAG3L4Q8TBR4 150 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 OR4C12Q96R67 309 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SLC25A21Q9BQT8 299 aaPredicted RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SNRNP25Q9BV90 132 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 PLAC8Q9NZF1 115 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 METTL1Q9UBP6 276 aaKnown RBP0.44□□□□□ -2.34
HIF1A-204ENST00000539097 JMJD1CQ15652 2540 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 ABCA12Q86UK0 2595 aa0.44□□□□□ -2.34
HIF1A-204ENST00000539097 SVEP1Q4LDE5 3571 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV30A0A087WSZ9 112 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 GGT3PA6NGU5 568 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 NPFFO15130 113 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HMGB3O15347 200 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 GNG7O60262 68 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 CD3DP04234 171 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 DSCR4P56555 118 aaPredicted RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 KRTAP12-3P60328 96 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 GABARAPL2P60520 117 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 PLGLB1Q02325 96 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 C10orf55Q5SWW7 151 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 RASL11AQ6T310 242 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 DAND5Q8N907 189 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 OTOSQ8NHW6 89 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 MCFD2Q8NI22 146 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 MRPL30Q8TCC3 161 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 SFT2D1Q8WV19 159 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 PPP3R2Q96LZ3 170 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 YIPF3Q9GZM5 350 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 C11orf68Q9H3H3 251 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM138Q9NPI0 162 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 LRRC37AA6NMS7 1700 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 NSD1Q96L73 2696 aaPredicted RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 DNAH2Q9P225 4427 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 A0A0G2JQZ4 141 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 CLPSL1A2RUU4 121 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 CST7O76096 145 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 GPX1P07203 203 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 NCMAPQ5T1S8 102 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 C2orf91Q6ZV80 131 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 OR13C6PQ8NH95 151 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 ADAT1Q9BUB4 502 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 CCDC32Q9BV29 185 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 CCDC90BQ9GZT6 254 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 EFCAB1Q9HAE3 211 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 NAT8Q9UHE5 227 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 FLG2Q5D862 2391 aaPredicted RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 DDX60Q8IY21 1712 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 IGLV3-32A0A0A0MS00 114 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 MCRIP1C9JLW8 97 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 SDCBPO00560 298 aaPredicted RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 LY6HO94772 140 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 IFNA17P01571 189 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 IGKV1-17P01599 117 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BOP23527 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 PEBP1P30086 187 aaKnown RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BBP33778 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BDP58876 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BCP62807 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST2H2BEQ16778 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 TDRG1Q3Y452 100 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.43□□□□□ -2.34
HIF1A-204ENST00000539097 C22orf39Q6P5X5 142 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 BRD3OSQ6XYD6 125 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 Q8N814 137 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 C5orf17Q8NAS9 161 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF439Q8NDP4 499 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BHQ93079 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM203Q969S6 136 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BNQ99877 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H2BMQ99879 126 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 DERL1Q9BUN8 251 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 FAM107BQ9H098 131 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 MYO9AB2RTY4 2548 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 LAMA5O15230 3695 aa0.43□□□□□ -2.34
HIF1A-204ENST00000539097 MRC1P22897 1456 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 WDR87Q6ZQQ6 2873 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV7A0A075B6U4 112 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 CXorf51AA0A1B0GTR3 108 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 H3BQF6 201 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 APOA2P02652 100 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 S100A8P05109 93 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 SLC25A5P05141 298 aaKnown RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 IGLC1P0CG04 106 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 GNG2P59768 71 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 PKIAP61925 76 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 DEFB103AP81534 67 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 RTL8BQ17RB0 113 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 Q1T7F1 81 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms