RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 UBE2WQ96B02 151 aa9.12□□□□□ -0.95
PBX3-212ENST00000538998 NDFIP1Q9BT67 221 aa9.12□□□□□ -0.95
PBX3-212ENST00000538998 CHCHD7Q9BUK0 85 aa9.12□□□□□ -0.95
PBX3-212ENST00000538998 UMAD1C9J7I0 102 aa9.11□□□□□ -0.95
PBX3-212ENST00000538998 PARLQ9H300 379 aa9.11□□□□□ -0.95
PBX3-212ENST00000538998 A0A087WX48 190 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 A8MWV9 139 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
PBX3-212ENST00000538998 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
PBX3-212ENST00000538998 Q0VG73 95 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 KCNIP4Q6PIL6 250 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 LINC00479Q96M42 142 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
PBX3-212ENST00000538998 RNASE3P12724 160 aaKnown RBP9.09□□□□□ -0.95
PBX3-212ENST00000538998 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
PBX3-212ENST00000538998 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
PBX3-212ENST00000538998 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 SERTM2A0A1B0GWG4 89 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 RAB5CP51148 216 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
PBX3-212ENST00000538998 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 SAMD10Q9BYL1 202 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 Q9UF83 564 aa9.08□□□□□ -0.96
PBX3-212ENST00000538998 CXorf1O96002 111 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 GCGP01275 180 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 GNG5P63218 68 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 DMRTA1Q5VZB9 504 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 ALKAL2Q6UX46 152 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
PBX3-212ENST00000538998 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 LRP2P98164 4655 aa9.07□□□□□ -0.96
PBX3-212ENST00000538998 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 TEX46H3BTG2 121 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 ARL14EPLP0DKL9 152 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 ASIPP42127 132 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 SULT1A2P50226 295 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 C9orf163Q8N9P6 203 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 ZC2HC1AQ96GY0 325 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 SGK494Q96LW2 274 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
PBX3-212ENST00000538998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
PBX3-212ENST00000538998 A0A1B0GV50 99 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 K7EQM0 130 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 RHODO00212 210 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 CRPP02741 224 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 S100A4P26447 101 aaKnown RBP9.05□□□□□ -0.96
PBX3-212ENST00000538998 FHITP49789 147 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 ZNF726P1Q15940 193 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 SMUG1Q53HV7 270 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 TMEM167BQ9NRX6 74 aa9.05□□□□□ -0.96
PBX3-212ENST00000538998 GCHFRP30047 84 aa9.04□□□□□ -0.96
PBX3-212ENST00000538998 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
PBX3-212ENST00000538998 JPT2Q9H910 190 aa9.04□□□□□ -0.96
PBX3-212ENST00000538998 IFNA7P01567 189 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 HLA-DQA1P01909 254 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 TCRAP04437 139 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 PRSS1P07477 247 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 BLOC1S1P78537 153 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
PBX3-212ENST00000538998 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
PBX3-212ENST00000538998 PANO1I0J062 215 aa9.02□□□□□ -0.97
PBX3-212ENST00000538998 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.97
PBX3-212ENST00000538998 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 UBE2G2P60604 165 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 FLI1Q01543 452 aaPredicted RBP9.01□□□□□ -0.97
PBX3-212ENST00000538998 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
PBX3-212ENST00000538998 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 TEX261Q6UWH6 196 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
PBX3-212ENST00000538998 TNXBP22105 4242 aa9□□□□□ -0.97
PBX3-212ENST00000538998 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
PBX3-212ENST00000538998 TRBV10-1A0A0K0K1A3 114 aa9□□□□□ -0.97
PBX3-212ENST00000538998 ANGP03950 147 aaKnown RBP9□□□□□ -0.97
PBX3-212ENST00000538998 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
PBX3-212ENST00000538998 MIAQ16674 131 aa9□□□□□ -0.97
PBX3-212ENST00000538998 SAPCD1Q5SSQ6 148 aa9□□□□□ -0.97
PBX3-212ENST00000538998 CST9LP1Q5W188 147 aa9□□□□□ -0.97
PBX3-212ENST00000538998 PRNTQ86SH4 94 aa9□□□□□ -0.97
PBX3-212ENST00000538998 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
PBX3-212ENST00000538998 IFNA1P01562 189 aa8.99□□□□□ -0.97
PBX3-212ENST00000538998 UBE2D3P61077 147 aa8.99□□□□□ -0.97
PBX3-212ENST00000538998 RAB14P61106 215 aa8.99□□□□□ -0.97
PBX3-212ENST00000538998 UBE2D2P62837 147 aa8.99□□□□□ -0.97
PBX3-212ENST00000538998 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
PBX3-212ENST00000538998 GNG13Q9P2W3 67 aa8.99□□□□□ -0.97
PBX3-212ENST00000538998 TRBV7-3A0A075B6L6 115 aa8.98□□□□□ -0.97
PBX3-212ENST00000538998 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms