RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PLAC8L1A1L4L8 177 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 RAB4AP20338 218 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 IQCJQ1A5X6 159 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 SMIM15Q7Z3B0 74 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
CLN6-202ENST00000538696 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
CLN6-202ENST00000538696 GSN-AS1Q9NRJ2 163 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 U3KQK5 164 aa12.35□□□□□ -0.43
CLN6-202ENST00000538696 COL7A1Q02388 2944 aa12.34□□□□□ -0.43
CLN6-202ENST00000538696 MUC4Q99102 2169 aa12.34□□□□□ -0.43
CLN6-202ENST00000538696 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
CLN6-202ENST00000538696 C16orf74Q96GX8 76 aa12.34□□□□□ -0.43
CLN6-202ENST00000538696 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
CLN6-202ENST00000538696 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
CLN6-202ENST00000538696 A0A0J9YWU9 116 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 D6R8Y8 96 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 SMKR1H3BMG3 65 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 NCR2O95944 276 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 Q0VG73 95 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 C14orf178Q8N769 122 aaPredicted RBP12.33□□□□□ -0.44
CLN6-202ENST00000538696 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 JPT2Q9H910 190 aa12.33□□□□□ -0.44
CLN6-202ENST00000538696 HOXA5P20719 270 aa12.32□□□□□ -0.44
CLN6-202ENST00000538696 LINC00310P59036 64 aa12.32□□□□□ -0.44
CLN6-202ENST00000538696 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
CLN6-202ENST00000538696 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 EMP1P54849 157 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 OR10J3Q5JRS4 329 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 DPH3P1Q9H4G8 78 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 KIF25-AS1Q9Y6Z4 181 aa12.31□□□□□ -0.44
CLN6-202ENST00000538696 M0R2P5 195 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 MGPP08493 103 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
CLN6-202ENST00000538696 A0A087WWL8 130 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 NUPR1O60356 82 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 SERF1AO75920 110 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 GATA1P15976 413 aaPredicted RBP12.29□□□□□ -0.44
CLN6-202ENST00000538696 CKS2P33552 79 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 LINC00315P59091 139 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 PTH2Q96A98 100 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 SPXQ9BT56 116 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 SAMD10Q9BYL1 202 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 EDA2RQ9HAV5 297 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
CLN6-202ENST00000538696 CELA1Q9UNI1 258 aa12.29□□□□□ -0.44
CLN6-202ENST00000538696 TRAV26-2A0A0B4J265 109 aa12.28□□□□□ -0.44
CLN6-202ENST00000538696 IFITM10A6NMD0 228 aa12.28□□□□□ -0.44
CLN6-202ENST00000538696 NPYP01303 97 aa12.28□□□□□ -0.44
CLN6-202ENST00000538696 FAM222AQ5U5X8 452 aa12.27□□□□□ -0.45
CLN6-202ENST00000538696 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
CLN6-202ENST00000538696 STAB2Q8WWQ8 2551 aa12.27□□□□□ -0.45
CLN6-202ENST00000538696 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.45
CLN6-202ENST00000538696 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
CLN6-202ENST00000538696 PPBPP02775 128 aa12.26□□□□□ -0.45
CLN6-202ENST00000538696 CRYGDP07320 174 aa12.26□□□□□ -0.45
CLN6-202ENST00000538696 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
CLN6-202ENST00000538696 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
CLN6-202ENST00000538696 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
CLN6-202ENST00000538696 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
CLN6-202ENST00000538696 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
CLN6-202ENST00000538696 NRACQ8N912 160 aa12.25□□□□□ -0.45
CLN6-202ENST00000538696 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
CLN6-202ENST00000538696 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
CLN6-202ENST00000538696 ESDP10768 282 aa12.24□□□□□ -0.45
CLN6-202ENST00000538696 PIK3CD-AS1Q5SR53 167 aa12.24□□□□□ -0.45
CLN6-202ENST00000538696 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
CLN6-202ENST00000538696 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
CLN6-202ENST00000538696 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 LOC389332A0A1B0GUA5 103 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 Q6ZTI0 123 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 NIT1Q86X76 327 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 LAMTOR2Q9Y2Q5 125 aa12.23□□□□□ -0.45
CLN6-202ENST00000538696 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 A8MWV9 139 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 RS1O15537 224 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 S100A2P29034 98 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 ZNF56Q15929 161 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 C11orf45Q8TAV5 145 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 RASL10AQ92737 203 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
CLN6-202ENST00000538696 HIST1H2BLQ99880 126 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 NACAE9PAV3 2078 aa12.22□□□□□ -0.45
CLN6-202ENST00000538696 TGP01266 2768 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 F5H697 171 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 NANOS2P60321 138 aaKnown RBP12.21□□□□□ -0.45
CLN6-202ENST00000538696 C12orf74Q32Q52 190 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 UFSP1Q6NVU6 142 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
CLN6-202ENST00000538696 GAGE12BA1L429 117 aa12.2□□□□□ -0.46
CLN6-202ENST00000538696 GAGE7O76087 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms