RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SMIM12Q96EX1 92 aa9.1□□□□□ -0.95
CHFR-216ENST00000538235 NUDT11Q96G61 164 aa9.1□□□□□ -0.95
CHFR-216ENST00000538235 SMIM7Q9BQ49 75 aa9.1□□□□□ -0.95
CHFR-216ENST00000538235 Q9UF83 564 aa9.1□□□□□ -0.95
CHFR-216ENST00000538235 IGHV3-73A0A0B4J1V6 119 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 TRAV4A0A0B4J268 109 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 CXCL1P09341 107 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 LINC01551Q86U37 167 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 PTH2Q96A98 100 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CHFR-216ENST00000538235 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
CHFR-216ENST00000538235 PPP1R2P9O14990 202 aa9.08□□□□□ -0.96
CHFR-216ENST00000538235 CRYBA4P53673 196 aa9.08□□□□□ -0.96
CHFR-216ENST00000538235 PKIAP61925 76 aa9.08□□□□□ -0.96
CHFR-216ENST00000538235 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
CHFR-216ENST00000538235 A0A096LPF7 62 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 LY6G6CO95867 125 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
CHFR-216ENST00000538235 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
CHFR-216ENST00000538235 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
CHFR-216ENST00000538235 GTSF1Q8WW33 167 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 MSRB1Q9NZV6 116 aa9.07□□□□□ -0.96
CHFR-216ENST00000538235 M0R381 172 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 NUDT3O95989 172 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 CRYGDP07320 174 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 OR5AL1P0C617 328 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 LGALS9CQ6DKI2 356 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 OR4C5Q8NGB2 326 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
CHFR-216ENST00000538235 A0A087WWL8 130 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 P01737 135 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
CHFR-216ENST00000538235 TCTAP57738 103 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 FAM231DQ6ZW35 169 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 ISOC2Q96AB3 205 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 RPP21Q9H633 154 aaKnown RBP9.05□□□□□ -0.96
CHFR-216ENST00000538235 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 KIF25-AS1Q9Y6Z4 181 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
CHFR-216ENST00000538235 P0DMU3 169 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 LINC00694P0DN24 101 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 RAB4AP20338 218 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 CTRLP40313 264 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 LINC00315P59091 139 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 MRPL52Q86TS9 123 aaKnown RBP9.04□□□□□ -0.96
CHFR-216ENST00000538235 C14orf178Q8N769 122 aaPredicted RBP9.04□□□□□ -0.96
CHFR-216ENST00000538235 SLC25A29Q8N8R3 303 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 SFRP2Q96HF1 295 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 PRO0255Q9UI72 69 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
CHFR-216ENST00000538235 TRGV4A0A0C4DH28 118 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 H3BNG1 76 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 ESRGQ1W209 222 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 C15orf53Q8NAA6 179 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 HHLA3Q9XRX5 114 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 PHLDA3Q9Y5J5 127 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 V9GYV3 84 aa9.03□□□□□ -0.96
CHFR-216ENST00000538235 FAT2Q9NYQ8 4349 aa9.02□□□□□ -0.96
CHFR-216ENST00000538235 K7EQD1 137 aa9.02□□□□□ -0.97
CHFR-216ENST00000538235 PAX4O43316 350 aa9.02□□□□□ -0.97
CHFR-216ENST00000538235 TPPP3Q9BW30 176 aa9.02□□□□□ -0.97
CHFR-216ENST00000538235 NAT8Q9UHE5 227 aa9.02□□□□□ -0.97
CHFR-216ENST00000538235 A8MWV9 139 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 GYPEP15421 78 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 ADIRFQ15847 76 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 TMEM241Q24JQ0 296 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 DAZAP1Q96EP5 407 aaKnown RBP9.01□□□□□ -0.97
CHFR-216ENST00000538235 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
CHFR-216ENST00000538235 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
CHFR-216ENST00000538235 FOXA3P55318 350 aaPredicted RBP9□□□□□ -0.97
CHFR-216ENST00000538235 NDUFA6P56556 154 aa9□□□□□ -0.97
CHFR-216ENST00000538235 ERVFC1-1P60608 527 aa9□□□□□ -0.97
CHFR-216ENST00000538235 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
CHFR-216ENST00000538235 ZNRF2Q8NHG8 242 aa9□□□□□ -0.97
CHFR-216ENST00000538235 YPEL4Q96NS1 127 aa9□□□□□ -0.97
CHFR-216ENST00000538235 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
CHFR-216ENST00000538235 OSTCQ9NRP0 149 aa9□□□□□ -0.97
CHFR-216ENST00000538235 EPPK1P58107 5090 aaKnown RBP8.99□□□□□ -0.97
CHFR-216ENST00000538235 DDTP30046 118 aa8.99□□□□□ -0.97
CHFR-216ENST00000538235 ZFP2Q6ZN57 461 aa8.99□□□□□ -0.97
CHFR-216ENST00000538235 SYT8Q8NBV8 401 aa8.99□□□□□ -0.97
CHFR-216ENST00000538235 ICOSQ9Y6W8 199 aa8.99□□□□□ -0.97
CHFR-216ENST00000538235 IGLV2-18A0A075B6J9 118 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 TRBV6-4A0A1B0GX49 114 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 EVI2AP22794 236 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 ELOBQ15370 118 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 CT83Q5H943 113 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 SPANXN1Q5VSR9 72 aa8.98□□□□□ -0.97
CHFR-216ENST00000538235 PGLYRP4Q96LB8 373 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms